RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 KCTD18Q6PI47 426 aaPredicted RBP10.61□□□□□ -0.71
USP40-205ENST00000430158 UNQ6126/PRO20091Q6UXV3 157 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 Q6ZR03 302 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 KRT77Q7Z794 578 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 LRRC75A-AS1Q8N1F1 130 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 ZNF283Q8N7M2 679 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 OR10H4Q8NGA5 316 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 OR52I1Q8NGK6 324 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 GTF3AQ92664 365 aaKnown RBP10.61□□□□□ -0.71
USP40-205ENST00000430158 SGK3Q96BR1 496 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 COG8Q96MW5 612 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 TBX5Q99593 518 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 FOXC2Q99958 501 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 REPIN1Q9BWE0 567 aaKnown RBP10.61□□□□□ -0.71
USP40-205ENST00000430158 CACNG6Q9BXT2 260 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 TTTY10Q9BZA0 68 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 G6PC2Q9NQR9 355 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 PTTG3PQ9NZH4 202 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 PCDHGB5Q9Y5G0 923 aa10.61□□□□□ -0.71
USP40-205ENST00000430158 ACOD1A6NK06 481 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 VSTM5A8MXK1 200 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 LILRA1O75019 489 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 FAM20BO75063 409 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 SULT1C4O75897 302 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 IGLV3-1P01715 115 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 IGHV4-39P01824 125 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 LIMS3P0CW19 117 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 LIMS4P0CW20 117 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 ALDH3B1P43353 468 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 HSPA13P48723 471 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 MMP16P51512 607 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 MVKQ03426 396 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 MFGE8Q08431 387 aaPredicted RBP10.6□□□□□ -0.71
USP40-205ENST00000430158 C6orf141Q5SZD1 244 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 GLYATL3Q5SZD4 288 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 DNM1P46Q6ZS02 220 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 ZCCHC24Q8N2G6 241 aaKnown RBP10.6□□□□□ -0.71
USP40-205ENST00000430158 ACBD7Q8N6N7 88 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 GGHQ92820 318 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 PPP1R14AQ96A00 147 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 MROQ9BYG7 248 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 CXorf56Q9H5V9 222 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 ERVK13-1Q9NX77 482 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 TAAR3PQ9P1P4 343 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 PSORS1C1Q9UIG5 152 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 DUSP13Q9UII6 198 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 PURGQ9UJV8 347 aaKnown RBP10.6□□□□□ -0.71
USP40-205ENST00000430158 EDARQ9UNE0 448 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 PCDHGB1Q9Y5G3 927 aa10.6□□□□□ -0.71
USP40-205ENST00000430158 YLPM1P49750 1951 aaKnown RBP10.59□□□□□ -0.71
USP40-205ENST00000430158 METTL15A6NJ78 407 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 XPNPEP2O43895 674 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 FADS2O95864 444 aaKnown RBP10.59□□□□□ -0.71
USP40-205ENST00000430158 APOC1P02654 83 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 ADH4P08319 380 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 PIPP12273 146 aaPredicted RBP10.59□□□□□ -0.71
USP40-205ENST00000430158 ATP6V1E1P36543 226 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 SLC6A9P48067 706 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 SNRPD2P62316 118 aaKnown RBP10.59□□□□□ -0.71
USP40-205ENST00000430158 ACTC1P68032 377 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 ACTA1P68133 377 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 GALEQ14376 348 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 KLHL22Q53GT1 634 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 LIPNQ5VXI9 398 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 FDX2Q6P4F2 183 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 PLEKHG7Q6ZR37 379 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 Q6ZSR3 168 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 FAM57BQ71RH2 274 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 KRT74Q7RTS7 529 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.59□□□□□ -0.71
USP40-205ENST00000430158 EGFL6Q8IUX8 553 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 OR8B12Q8NGG6 310 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 OR52H1Q8NGJ2 320 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 OR5L1Q8NGL2 311 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 OR2AE1Q8NHA4 323 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 RORBQ92753 470 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 LYZL4Q96KX0 146 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 SORCS2Q96PQ0 1159 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 SIGLEC11Q96RL6 698 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 SOX7Q9BT81 388 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 INPP5EQ9NRR6 644 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 RAB26Q9ULW5 256 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 MTORP42345 2549 aa10.59□□□□□ -0.71
USP40-205ENST00000430158 ABCA1O95477 2261 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 hCG_38984A0A1B0GV85 526 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 TMEM269A0A1B0GVZ9 245 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 ZSCAN5BA6NJL1 495 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 IQCF6A8MYZ5 107 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 M0R233 179 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 DENRO43583 198 aaKnown RBP10.58□□□□□ -0.72
USP40-205ENST00000430158 DCKP27707 260 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 HSD11B1P28845 292 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 GCH1P30793 250 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 RIDAP52758 137 aaKnown RBP10.58□□□□□ -0.72
USP40-205ENST00000430158 OR12D2P58182 307 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 FAM3AP98173 230 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 TP53I3Q53FA7 332 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 OR2T2Q6IF00 324 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 LHFPL3Q86UP9 236 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 ZNF485Q8NCK3 441 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms