RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MESP2Q0VG99 397 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 CHIT1Q13231 466 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 BATFQ16520 125 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 MORN2Q502X0 79 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 MS4A13Q5J8X5 152 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF468Q5VIY5 522 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 PRAMEF9Q5VWM5 478 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF738Q8NE65 137 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 PSMG2Q969U7 264 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 MOB3AQ96BX8 217 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 RPUSD4Q96CM3 377 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 BPIFA2Q96DR5 249 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 TMEM56Q96MV1 263 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 HIST1H2AAQ96QV6 131 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 MS4A8Q9BY19 250 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC2A4RGQ9NR83 387 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 ARL15Q9NXU5 204 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 TMEM56-RWDD3S4R434 201 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 TRBV2A0A0J9YWF9 115 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 A0A1W2PQH9 124 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 A0A1W2PR48 441 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 M0R3H8 397 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 KLF4O43474 513 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 WDR1O75083 606 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 CTAG2O75638 210 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 VAMP5O95183 116 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 IGSF6O95976 241 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 FURINP09958 794 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 CSRP1P21291 193 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 TACR2P21452 398 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 FLT3LGP49771 235 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 PMS2P11Q13670 270 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 CLLU1OSQ5K130 101 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 C1orf122Q6ZSJ8 110 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 RNF175Q8N4F7 328 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 COX18Q8N8Q8 333 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR4C5Q8NGB2 326 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR51A2Q8NGJ7 313 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 ADAMTS18Q8TE60 1221 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 TOMM40LQ969M1 308 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 PELI1Q96FA3 418 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 LYSMD1Q96S90 227 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 SMAD5Q99717 465 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 GINS3Q9BRX5 216 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 C1QTNF2Q9BXJ5 285 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC17A5Q9NRA2 495 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR5AC2Q9NZP5 309 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 GPR34Q9UPC5 381 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 SH2B3Q9UQQ2 575 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 VSIG4Q9Y279 399 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 RBM7Q9Y580 266 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 C13orf42A0A1B0GVH6 325 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 NPIPA7E9PJI5 369 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 CLDN34H7C241 214 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 NME2P1O60361 137 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 NPIPA8P0DM63 369 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 RHOQP17081 205 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 EDNRAP25101 427 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 SOAT1P35610 550 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 COL10A1Q03692 680 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF763Q0D2J5 394 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 C10orf120Q5SQS8 335 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 PRAMEF20Q5VT98 475 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 MAML2Q8IZL2 1156 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR56A1Q8NGH5 318 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR52E1Q8NGJ3 308 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 CPT1CQ8TCG5 803 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 RPS4Y2Q8TD47 263 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 LPAR4Q99677 370 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 NIPSNAP3BQ9BS92 247 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC25A18Q9H1K4 315 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 CAPN10Q9HC96 672 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 RAB18Q9NP72 206 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 MEMO1Q9Y316 297 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 TRAV18A0A075B6X5 111 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 TRAV30A0A087WSZ9 112 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 K7ERU9 68 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 ETV2O00321 342 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 BHLHE40O14503 412 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 NUDT21O43809 227 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 MMP23AO75900 390 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC25A14O95258 325 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 CHRM2P08172 466 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 CFPP27918 469 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 ALDH3B1P43353 468 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 CAMLGP49069 296 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC25A1P53007 311 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 TMEM33P57088 247 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 HIST1H3AP68431 136 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 YOD1Q5VVQ6 348 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 COMMD6Q7Z4G1 85 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF429Q86V71 674 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 MEX3DQ86XN8 651 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 SUN3Q8TAQ9 357 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 CTHRC1Q96CG8 243 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 LYRM2Q9NU23 88 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 CYP8B1Q9UNU6 501 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 KCNK6Q9Y257 313 aa7.94□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZC3H12DA2A288 527 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms