RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CYP4Z1Q86W10 505 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 RSRC1Q96IZ7 334 aaKnown RBP15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 ATF6BQ99941 703 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 TMEM120AQ9BXJ8 343 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 SLC22A4Q9H015 551 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 C16orf95Q9H693 158 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 C1orf123Q9NWV4 160 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 GMPR2Q9P2T1 348 aaKnown RBP15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 IGLV1-36A0A0B4J1U3 117 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 BTBD17A6NE02 478 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 MDH1P40925 334 aaKnown RBP15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 RPS6KA3P51812 740 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 ECH1Q13011 328 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 KLF10Q13118 480 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 MAPRE2Q15555 327 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 SLC18B1Q6NT16 456 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 DPY19L2P2Q6ZN68 376 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 SLC7A13Q8TCU3 470 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 ST8SIA4Q92187 359 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 HSH2DQ96JZ2 352 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 ANKRD19PQ9H560 264 aa15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 SRA1Q9HD15 236 aaKnown RBP15.1■□□□□ 0.01
UPK3BP1-201ENST00000428678 ZNF816-ZNF321PA0A0X1KG74 233 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 LOC100653049A0A140TA62 436 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 hCG_1807616A0A1W2PRN6 198 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 C5orf63A6NC05 138 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 A6NLC8 198 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 CD300LBA8K4G0 201 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 G3V4G9 280 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 DVL1O14640 695 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 GMDSO60547 372 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 KRT34O76011 436 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 TXNDC12O95881 172 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 ECDO95905 644 aaPredicted RBP15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 GRPP07492 148 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 GGT2P36268 569 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 EGR3Q06889 387 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 DBPQ10586 325 aaPredicted RBP15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 POU4F2Q12837 409 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 FGD3Q5JSP0 725 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 VMO1Q7Z5L0 202 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 FAM90A1Q86YD7 464 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 SLC26A10Q8NG04 563 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 OR2AJ1Q8NGZ0 328 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 SEMA6AQ9H2E6 1030 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 CNTD2Q9H8S5 307 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 ONECUT1Q9UBC0 465 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 VPREB3Q9UKI3 123 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 B9D1Q9UPM9 204 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 AURKCQ9UQB9 309 aa15.09■□□□□ 0.01
UPK3BP1-201ENST00000428678 GGT3PA6NGU5 568 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 CXCR6O00574 342 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 GSTA4O15217 222 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 FCN3O75636 299 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 ALX3O95076 343 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 PPP1R3DO95685 299 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 FBP1P09467 338 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 TPTEP56180 551 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 FXYD6P3P58550 94 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 SLC36A3Q495N2 470 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 CDONQ4KMG0 1287 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 ZNF826PQ6ZT77 177 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 OR6V1Q8N148 313 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 PLPP7Q8NBV4 271 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 ERMAPQ96PL5 475 aaPredicted RBP15.08■□□□□ 0
UPK3BP1-201ENST00000428678 MRGBPQ9NV56 204 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 CMTM6Q9NX76 183 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 RPUSD1Q9UJJ7 312 aaKnown RBP15.08■□□□□ 0
UPK3BP1-201ENST00000428678 CAB39Q9Y376 341 aaPredicted RBP15.08■□□□□ 0
UPK3BP1-201ENST00000428678 KPTNQ9Y664 436 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 PLXNB1O43157 2135 aa15.08■□□□□ 0
UPK3BP1-201ENST00000428678 IGHV3OR15-7A0A075B7D8 119 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 A0A1B0GVI7 797 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 UNC119BA6NIH7 251 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 M0R135 149 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 PTBP3O95758 552 aaKnown RBP15.07■□□□□ 0
UPK3BP1-201ENST00000428678 RENP00797 406 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 HLA-DQA2P01906 255 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 PRB2P02812 416 aaPredicted RBP15.07■□□□□ 0
UPK3BP1-201ENST00000428678 H1F0P07305 194 aaKnown RBP15.07■□□□□ 0
UPK3BP1-201ENST00000428678 ZNF92Q03936 586 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 BEAN1Q3B7T3 259 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 C11orf91Q3C1V1 193 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 CBLL1Q75N03 491 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 FGFRL1Q8N441 504 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 GCSAMQ8N6F7 178 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 OR2AE1Q8NHA4 323 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 ZNF799Q96GE5 643 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 NMNAT3Q96T66 252 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 ZNRD1Q9P1U0 126 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 ENPP4Q9Y6X5 453 aa15.07■□□□□ 0
UPK3BP1-201ENST00000428678 A0A1W2PRQ8 180 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 TSPAN9O75954 239 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 SERPINA1P01009 418 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 OMPP47874 163 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 PRB3Q04118 309 aaPredicted RBP15.06■□□□□ 0
UPK3BP1-201ENST00000428678 LIPEQ05469 1076 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 SF3A3Q12874 501 aaKnown RBP eCLIP15.06■□□□□ 0
UPK3BP1-201ENST00000428678 DGCR6Q14129 220 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms