RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 M0R135 149 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 CYTIPO60759 359 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 H2AFB2P0C5Z0 115 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 PRSS3P35030 304 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF93P35789 620 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-210ENST00000428307 MNDAP41218 407 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 CLDN18P56856 261 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 RRAS2P62070 204 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-210ENST00000428307 BTG1P62324 171 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 PPIAP62937 165 aaKnown RBP9.14□□□□□ -0.95
HDAC9-210ENST00000428307 PDSS1Q5T2R2 415 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF774Q6NX45 483 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 ADGRE4PQ86SQ3 457 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 ANGPTL5Q86XS5 388 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 ACBD4Q8NC06 268 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 OR8S1Q8NH09 359 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 FNDC9Q8TBE3 224 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 FOXRED1Q96CU9 486 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF799Q96GE5 643 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 C7orf50Q9BRJ6 194 aaKnown RBP9.14□□□□□ -0.95
HDAC9-210ENST00000428307 OR10A4Q9H209 315 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 COPZ2Q9P299 210 aa9.14□□□□□ -0.95
HDAC9-210ENST00000428307 NOSIPQ9Y314 301 aaKnown RBP9.14□□□□□ -0.95
HDAC9-210ENST00000428307 DNAJC13O75165 2243 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 CDRT15L2A8MXV6 281 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 KLRC4-KLRK1H3BQV0 150 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 H7C417 338 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 SGCEO43556 437 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 MRPL33O75394 65 aaKnown RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 GSTT2BP0CG30 244 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 CTSSP25774 331 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 ARG2P78540 354 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 SFRP5Q5T4F7 317 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 C9orf135Q5VTT2 229 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 DOK3Q7L591 496 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 TUSC5Q8IXB3 177 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 SLC22A24Q8N4F4 322 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 MDS2Q8NDY4 140 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 AKR7LQ8NHP1 331 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 NPRL2Q8WTW4 380 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 CAPSLQ8WWF8 208 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 AKAP1Q92667 903 aaKnown RBP eCLIP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 LYZL4Q96KX0 146 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 FOXB1Q99853 325 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 FAM117AQ9C073 453 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 DEFB127Q9H1M4 99 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 CALHM2Q9HA72 323 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 SLC17A5Q9NRA2 495 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 TMEM38BQ9NVV0 291 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 MTFP1Q9UDX5 166 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 RHBDD3Q9Y3P4 386 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 CSAG2Q9Y5P2 127 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 LINC01387J3KSC0 135 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 LDLRAD4O15165 306 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 NME2P1O60361 137 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 HCKP08631 526 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF32P17041 273 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 PSMB1P20618 241 aaKnown RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 NME2P22392 152 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 CCL11P51671 97 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 PRSS12P56730 875 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 HIST1H3AP68431 136 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 MRPS15P82914 257 aaKnown RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 PMPCAQ10713 525 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 HIST2H3PS2Q5TEC6 136 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 TSPO2Q5TGU0 170 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 HIST2H3AQ71DI3 136 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 BTN2A1Q7KYR7 527 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 PAQR4Q8N4S7 273 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 OR4D10Q8NGI6 311 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 OR14K1Q8NGZ2 314 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 FGFBP3Q8TAT2 258 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 CPT1CQ8TCG5 803 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 DVL3Q92997 716 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 CMBLQ96DG6 245 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF486Q96H40 463 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 PRRG4Q9BZD6 226 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 C20orf85Q9H1P6 137 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 METTL17Q9H7H0 456 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 PAQR5Q9NXK6 330 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 KLF13Q9Y2Y9 288 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-210ENST00000428307 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
HDAC9-210ENST00000428307 PTPRZ1P23471 2315 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-210ENST00000428307 KMT2EQ8IZD2 1858 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 PRR33A8MZF0 331 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 VSIG8P0DPA2 414 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 GABRA1P14867 456 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 CD46P15529 392 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF708P17019 499 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 OTX1P32242 354 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-210ENST00000428307 VEGFCP49767 419 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 UNC119Q13432 240 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 FCN2Q15485 313 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 GSG1Q2KHT4 349 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 SNAI3Q3KNW1 292 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 AWAT2Q6E213 333 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF529Q6P280 563 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 DNM1P46Q6ZS02 220 aa9.12□□□□□ -0.95
HDAC9-210ENST00000428307 ZNF101Q8IZC7 436 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms