RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 FZR1Q9UM11 496 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 IGKV6D-21A0A0A0MT36 114 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 IGHV3-64DA0A0J9YX35 117 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 ZNF816-ZNF321PA0A0X1KG74 233 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 TMEM30CPA0ZSE6 113 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 K7ESF4 209 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 AGPAT2O15120 278 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 HPP00738 406 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 S100A8P05109 93 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 KIR2DL1P43626 348 aaPredicted RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 KIR2DL2P43627 348 aaPredicted RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 SOX8P57073 446 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 SLAQ13239 276 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 ALKBH1Q13686 389 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 C9orf50Q5SZB4 431 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 GLIPR1L1Q6UWM5 242 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 GALNT16Q8N428 558 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 MBNL1Q9NR56 388 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 AJAP1Q9UKB5 411 aaPredicted RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 hADV38S2A0JD32 116 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 TMEM72A0PK05 275 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 AQP7P3A6NL99 342 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 IL9P15248 144 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 RAB7AP51149 207 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 SH3BP2P78314 561 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 JAG1P78504 1218 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 KHDC1Q4VXA5 237 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 BTNL8Q6UX41 500 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 Q8IYB0 196 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 SPICQ8N5J4 248 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 TMEM217Q8N7C4 229 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 GDPD1Q8N9F7 314 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 CLRN3Q8NCR9 226 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 MKRN2Q9H000 416 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 TXNL4BQ9NX01 149 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 ADAMTS6Q9UKP5 1117 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 HDGFL3Q9Y3E1 203 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 N4BP2Q86UW6 1770 aaPredicted RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 LOC285095A0A1B0GVY8 99 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 MFSD2BA6NFX1 497 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 ZNF705GA8MUZ8 300 aaPredicted RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 K7ESM1 405 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 ARPC1BO15143 372 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 DRD5P21918 477 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 PPP1CCP36873 323 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 SPCS3P61009 180 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 EXOSC2Q13868 293 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 GGTLC2Q14390 218 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 IGFBP7Q16270 282 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 PXDC1Q5TGL8 231 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 TIGD3Q6B0B8 471 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 FUNDC1Q8IVP5 155 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 SLC38A6Q8IZM9 456 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 OR52H1Q8NGJ2 320 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 OR6K3Q8NGY3 331 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 OR51H1Q8NH63 302 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 MARCH5Q9NX47 278 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 HCSTQ9UBK5 93 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 CCDC88AQ3V6T2 1871 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 A0A1B0GV72 72 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 OR7C2O60412 319 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 ADAM11O75078 769 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 FGF3P11487 239 aaPredicted RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 BMP2P12643 396 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 HTN1P15515 57 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 PCSK6P29122 969 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 CSNK1G2P78368 415 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 ZXDAP98168 799 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 HMGN3Q15651 99 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 GTDC1Q4AE62 458 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 OR2B11Q5JQS5 317 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 STEAP1BQ6NZ63 245 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 NHLRC1Q6VVB1 395 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 GPR32P1Q8NGA4 272 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 OR13G1Q8NGZ3 307 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 FAM213BQ8TBF2 198 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 CT55Q8WUE5 264 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 APOBEC3DQ96AK3 386 aaPredicted RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 ARSGQ96EG1 525 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 ZNF300Q96RE9 604 aaPredicted RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 NMNAT3Q96T66 252 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 TIMP4Q99727 224 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 FUNDC2Q9BWH2 189 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 C1QTNF3Q9BXJ4 246 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 DUSP22Q9NRW4 184 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 KCNG2Q9UJ96 466 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 CEPT1Q9Y6K0 416 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 PHRF1Q9P1Y6 1649 aaKnown RBP5.2□□□□□ -1.58
HERC4-206ENST00000427635 NFAT5O94916 1531 aa5.2□□□□□ -1.58
HERC4-206ENST00000427635 A0A1W2PNR3 127 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 FRG2CA6NGY1 282 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 LILRA5A6NI73 299 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 LMO7DNF2Z398 122 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 M0R135 149 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 GREM1O60565 184 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MRPS14O60783 128 aaKnown RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 DUSP1P28562 367 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 RAB5CP51148 216 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SLC10A2Q12908 348 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 STPG1Q5TH74 334 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms