RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FAM27D1Q5T7N8 215 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 MARC1Q5VT66 337 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 CST9Q5W186 159 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 WDR25Q64LD2 544 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 TFAP2EQ6VUC0 442 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 C9orf139Q6ZV77 190 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 FAM19A5Q7Z5A7 132 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 DPPA2Q7Z7J5 298 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 RBM23Q86U06 439 aaKnown RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM135Q86UB9 458 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 C10orf107Q8IVU9 208 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SLC30A8Q8IWU4 369 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 NRMQ8IXM6 262 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 PRR22Q8IZ63 422 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 BLIDQ8IZY5 108 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 PNKDQ8N490 385 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SPICQ8N5J4 248 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 OR6K3Q8NGY3 331 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 STOML3Q8TAV4 291 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 KCTD4Q8WVF5 259 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 RASL10AQ92737 203 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 EEF1AKMT3Q96AZ1 226 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 MED8Q96G25 268 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 WBP1Q96G27 269 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SFRP2Q96HF1 295 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 LYZL4Q96KX0 146 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF488Q96MN9 340 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 ATF6BQ99941 703 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 TIPINQ9BVW5 301 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 OR51J1Q9H342 316 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 REEP1Q9H902 201 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 PLAC1Q9HBJ0 212 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 EXOSC4Q9NPD3 245 aaKnown RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 MEPEQ9NQ76 525 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 GLTPQ9NZD2 209 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 COMMD9Q9P000 198 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 VPS29Q9UBQ0 182 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 KLK11Q9UBX7 282 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 GNPTGQ9UJJ9 305 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 KLF12Q9Y4X4 402 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 OR51B2Q9Y5P1 312 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 CPQQ9Y646 472 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 CKAP5Q14008 2032 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 EVPLQ92817 2033 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 SNAPC4Q5SXM2 1469 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 NUP155O75694 1391 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 FANCIQ9NVI1 1328 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 SMIM9A6NGZ8 99 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 SYCE1LA8MT33 242 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 MIF4GDA9UHW6 222 aaKnown RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 OR11H12B2RN74 326 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 F5H5K5 113 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TSTD3H0UI37 97 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TAAR5O14804 337 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TNFSF12O43508 249 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ICOSLGO75144 302 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 SEC24AO95486 1093 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TBX6O95947 436 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 PCCAP05165 728 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 CD55P08174 381 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 CST2P09228 141 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 LINC00614P0C842 121 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF12P17014 697 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF17P17021 662 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TNFRSF1BP20333 461 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 CHRNB4P30926 498 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 MPIP34949 423 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 IFNGR2P38484 337 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 KIR2DS4P43632 304 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TTPAP49638 278 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 GPM6AP51674 278 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 CRYBA4P53673 196 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 AP1S2P56377 157 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 AP1S1P61966 158 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 PPP1CBP62140 327 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 RPL18AQ02543 176 aaKnown RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 FASTKQ14296 549 aaKnown RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 GINS1Q14691 196 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TAB1Q15750 504 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 NRF1Q16656 503 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ECSCRQ19T08 205 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 IZUMO4Q1ZYL8 232 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 CEACAM21Q3KPI0 293 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 MS4A13Q5J8X5 152 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 FAM120AOSQ5T036 256 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 C1orf146Q5VVC0 180 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ISCA2Q86U28 154 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 CLVS1Q8IUQ0 354 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 SKA3Q8IX90 412 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 OR6V1Q8N148 313 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 FBXL14Q8N1E6 418 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 GPD1LQ8N335 351 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM199Q8N511 208 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ATPAF2Q8N5M1 289 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF557Q8N988 423 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-205ENST00000424674 OR11H1Q8NG94 326 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 OR52B6Q8NGF0 335 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 OR52E4Q8NGH9 312 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 OR2A1Q8NGT9 310 aa3.05□□□□□ -1.92
SF3B1-205ENST00000424674 OR11H2Q8NH07 326 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms