RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 BCL6BQ8N143 479 aaPredicted RBP9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 CYB561A3Q8NBI2 242 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 OR9Q2Q8NGE9 314 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 OR10S1Q8NGN2 331 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 SLC25A28Q96A46 364 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 C1orf147Q96MC9 270 aaPredicted RBP9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 ZNF48Q96MX3 618 aaPredicted RBP9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 BTBD10Q9BSF8 475 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 COPS4Q9BT78 406 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 ADAT1Q9BUB4 502 aaKnown RBP9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 ZNF747Q9BV97 191 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 TRIM15Q9C019 465 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 EGLN3Q9H6Z9 239 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 FN3KRPQ9HA64 309 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 MRPL15Q9P015 296 aaKnown RBP9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 ARL2BPQ9Y2Y0 163 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 PCDHGB1Q9Y5G3 927 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 COMMD3-BMI1R4GMX3 469 aa9.65□□□□□ -0.86
SQSTM1-203ENST00000422245 KIR2DS1A0A191URI9 304 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 TNFRSF11BO00300 401 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 ENSAO43768 121 aaKnown RBP9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 GMDSO60547 372 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 DCTN3O75935 186 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 CCNB2O95067 398 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 PTBP3O95758 552 aaKnown RBP9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 CA6P23280 308 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 MSX2P35548 267 aaPredicted RBP9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 MAGEA2P43356 314 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 NPY4RP50391 375 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 MNAT1P51948 309 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 MXRA7P84157 204 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 PRAMEF6Q5VXH4 476 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 WDR25Q64LD2 544 aaPredicted RBP9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF770Q6IQ21 691 aaPredicted RBP9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 RASSF6Q6ZTQ3 369 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 SPERTQ8NA61 448 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 PLPP7Q8NBV4 271 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 DUX5Q96PT3 197 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 DDOQ99489 341 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 NUDT16L1Q9BRJ7 211 aaKnown RBP9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 TRIM36Q9NQ86 728 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 TBC1D23Q9NUY8 699 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 ARL8BQ9NVJ2 186 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 IL20Q9NYY1 176 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 ACTR3BQ9P1U1 418 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 RNF7Q9UBF6 113 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 BAIAP2Q9UQB8 552 aa9.64□□□□□ -0.87
SQSTM1-203ENST00000422245 IGHV3OR16-10A0A075B7F0 116 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 GGT3PA6NGU5 568 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 TVP23AA6NH52 213 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 LGALS8O00214 317 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 XRCC2O43543 280 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 SPARCP09486 303 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 ATP6V1B2P21281 511 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 PSMB10P40306 273 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 RPS27P42677 84 aaKnown RBP9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 ENTPD1P49961 510 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 BLVRAP53004 296 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 BPIFB3P59826 476 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 IL13RA1P78552 427 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF92Q03936 586 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 MZT1Q08AG7 82 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 SLC9A3R2Q15599 337 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 PCK2Q16822 640 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 SNAI3Q3KNW1 292 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 PRR31Q5SQ13 230 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 GLYATL3Q5SZD4 288 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 DCXRQ7Z4W1 244 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 NAA40Q86UY6 237 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 LNX2Q8N448 690 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 FITM2Q8N6M3 262 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 SLC37A3Q8NCC5 494 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 OR8D4Q8NGM9 314 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 OR9Q1Q8NGQ5 310 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 OR2AE1Q8NHA4 323 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 MMADHCQ9H3L0 296 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 MUC13Q9H3R2 512 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 MAGIXQ9H6Y5 334 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 UFSP2Q9NUQ7 469 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 KIF17Q9P2E2 1029 aa9.63□□□□□ -0.87
SQSTM1-203ENST00000422245 C22orf46C9J442 243 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF878C9JN71 531 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 TMPRSS2O15393 492 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 IFNGP01579 166 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 PSKH1P11801 424 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 SPI1P17947 270 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 FMO3P31513 532 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 SLC25A1P53007 311 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 FGF12P61328 243 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 GNGT1P63211 74 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 CRMP1Q14194 572 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 TAF13Q15543 124 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 MPPED2Q15777 294 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 TEX30Q5JUR7 227 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 GPR157Q5UAW9 335 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 CD276Q5ZPR3 534 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 LYPD4Q6UWN0 246 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 CYP2R1Q6VVX0 501 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF841Q6ZN19 808 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms