RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 AURKCQ9UQB9 309 aa13.96□□□□□ -0.17
UPF3AP3-201ENST00000420996 TRAV38-1A0A0B4J264 116 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 UNC119BA6NIH7 251 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 ADAM20O43506 726 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 GMDSO60547 372 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 PTBP3O95758 552 aaKnown RBP13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 CA6P23280 308 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 PROK1P58294 105 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 HOXA4Q00056 320 aaPredicted RBP13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 TRAP1Q12931 704 aaKnown RBP13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 SLC36A3Q495N2 470 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 FGD3Q5JSP0 725 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 SMARCD3Q6STE5 483 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 MRPL21Q7Z2W9 205 aaKnown RBP13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 LDLRAD3Q86YD5 345 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 LINC00346Q8IVM7 164 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 OR2AJ1Q8NGZ0 328 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 LHX4Q969G2 390 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 ERMAPQ96PL5 475 aaPredicted RBP13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 KRCC1Q9NPI7 259 aaPredicted RBP13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 FAM32AQ9Y421 112 aaKnown RBP13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 CAPN7Q9Y6W3 813 aa13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 PRKDCP78527 4128 aaKnown RBP13.95□□□□□ -0.18
UPF3AP3-201ENST00000420996 CD300LBA8K4G0 201 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 C3orf80F5H4A9 247 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 SLC22A2O15244 555 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 RENP00797 406 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 IGHV4-59P01825 116 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 RHCEP18577 417 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 IER3P46695 156 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 TPTEP56180 551 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 OR8B8Q15620 311 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 C11orf91Q3C1V1 193 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 ZBTB46Q86UZ6 589 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 BOLLQ8N9W6 283 aaKnown RBP13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 NMNAT3Q96T66 252 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 RASSF4Q9H2L5 321 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 SMURF1Q9HCE7 757 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 PNRC2Q9NPJ4 139 aaKnown RBP13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 NDUFAF4Q9P032 175 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 CYB5R1Q9UHQ9 305 aa13.94□□□□□ -0.18
UPF3AP3-201ENST00000420996 TRBV4-1A0A0J9YWV2 114 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 OOEPA6NGQ2 149 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 SLC22A31A6NKX4 558 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 NME4O00746 187 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 ARPC3O15145 178 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 ECDO95905 644 aaPredicted RBP13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 GGT2P36268 569 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 GSK3BP49841 420 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 ARF6P62330 175 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 SEC23BQ15437 767 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 BTN2A1Q7KYR7 527 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 ZSCAN4Q8NAM6 433 aaPredicted RBP13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 SCCPDHQ8NBX0 429 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 HOPXQ9BPY8 73 aaPredicted RBP13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 ADAT1Q9BUB4 502 aaKnown RBP13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 DPAGT1Q9H3H5 408 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 TCF7L1Q9HCS4 588 aa13.93□□□□□ -0.18
UPF3AP3-201ENST00000420996 A0A0U1RQK1 487 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 M0R135 149 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 HIST1H1CP16403 213 aaKnown RBP13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 SLC7A2P52569 658 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 RFX4Q33E94 735 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 CGB2Q6NT52 195 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 GDPGP1Q6ZNW5 385 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 HDXQ7Z353 690 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 SPERTQ8NA61 448 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 OR4K13Q8NH42 304 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 RP9Q8TA86 221 aaKnown RBP13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 FAM162AQ96A26 154 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 ZNF799Q96GE5 643 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 FUZQ9BT04 418 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 CNTD2Q9H8S5 307 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 RPRD1BQ9NQG5 326 aaKnown RBP13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 FGFR1OP2Q9NVK5 253 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 MRPL15Q9P015 296 aaKnown RBP13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 KCNG2Q9UJ96 466 aa13.92□□□□□ -0.18
UPF3AP3-201ENST00000420996 GGT3PA6NGU5 568 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 DVL1O14640 695 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 FCN3O75636 299 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 TSPAN15O95858 294 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 HLA-DQA2P01906 255 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 GYPAP02724 150 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 NCK1P16333 377 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 SLC6A6P31641 620 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 ZNF92Q03936 586 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 DBPQ10586 325 aaPredicted RBP13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 C8orf82Q6P1X6 216 aaPredicted RBP13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 Q6ZSV7 163 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 FAM90A1Q86YD7 464 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 GCSAMQ8N6F7 178 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 FANK1Q8TC84 345 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 LRTOMTQ8WZ04 291 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 SPTSSAQ969W0 71 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 MAP6Q96JE9 813 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 C7orf34Q96L11 122 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 DHRS1Q96LJ7 313 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 OR52D1Q9H346 318 aa13.91□□□□□ -0.18
UPF3AP3-201ENST00000420996 C16orf95Q9H693 158 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms