RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZNF418Q8TF45 676 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-206ENST00000420121 SLCO4A1Q96BD0 722 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 NIPSNAP1Q9BPW8 284 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 TMEM246Q9BRR3 403 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 CDADC1Q9BWV3 514 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 TBC1D23Q9NUY8 699 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 TMEM100Q9NV29 134 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 SAMHD1Q9Y3Z3 626 aaKnown RBP9.24□□□□□ -0.93
SSBP3-206ENST00000420121 CD300LBA8K4G0 201 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF823P16415 610 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 CD80P33681 288 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 SRP9P49458 86 aaKnown RBP9.23□□□□□ -0.93
SSBP3-206ENST00000420121 COMPP49747 757 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-206ENST00000420121 ENTPD1P49961 510 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 TPTEP56180 551 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 PAX8Q06710 450 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 SCGB2A2Q13296 93 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 MPPED2Q15777 294 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF404Q494X3 552 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 TEX30Q5JUR7 227 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 GLYATL3Q5SZD4 288 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 PRAMEF6Q5VXH4 476 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 PGAP1Q75T13 922 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 KLBQ86Z14 1044 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 MUC20Q8N307 709 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-206ENST00000420121 CELF2-AS1Q8N7Q2 184 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 PLPP7Q8NBV4 271 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 CCDC197Q8NCU1 140 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 OR2T33Q8NG76 320 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 OR2AE1Q8NHA4 323 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 Q8TCH9 128 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 FAM216AQ8WUB2 273 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 C22orf15Q8WYQ4 148 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 POP5Q969H6 163 aaKnown RBP9.23□□□□□ -0.93
SSBP3-206ENST00000420121 ASB9Q96DX5 294 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 C1orf21Q9H246 121 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 REEP1Q9H902 201 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 PRPF19Q9UMS4 504 aaKnown RBP9.23□□□□□ -0.93
SSBP3-206ENST00000420121 LRCH1Q9Y2L9 728 aa9.23□□□□□ -0.93
SSBP3-206ENST00000420121 TMEM89A2RUT3 159 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF593O00488 134 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-206ENST00000420121 FAM20BO75063 409 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 RAP2AP10114 183 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 SLC2A1P11166 492 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 CA6P23280 308 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 FMO3P31513 532 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 PRKXP51817 358 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 FAM98BQ52LJ0 330 aaKnown RBP9.22□□□□□ -0.93
SSBP3-206ENST00000420121 ESCO2Q56NI9 601 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 DRAM2Q6UX65 266 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 LYPD2Q6UXB3 125 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF841Q6ZN19 808 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 PRSS45Q7RTY3 260 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 IQCF1Q8N6M8 205 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 OR10G2Q8NGC3 310 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 SPTSSAQ969W0 71 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 SPSB4Q96A44 273 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 CCDC124Q96CT7 223 aaKnown RBP9.22□□□□□ -0.93
SSBP3-206ENST00000420121 SLAMF6Q96DU3 332 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 C1orf147Q96MC9 270 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF48Q96MX3 618 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-206ENST00000420121 FEVQ99581 238 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 SUCNR1Q9BXA5 334 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 MED20Q9H944 212 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 MARCH7Q9H992 704 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 CMC2Q9NRP2 79 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF69Q9UC07 566 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 BAIAP2Q9UQB8 552 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 AUP1Q9Y679 476 aa9.22□□□□□ -0.93
SSBP3-206ENST00000420121 PKD1L1Q8TDX9 2849 aa9.21□□□□□ -0.93
SSBP3-206ENST00000420121 DHRS12A0PJE2 317 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 ARRDC5A6NEK1 342 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 FAM183AA6NL82 134 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 TNFRSF13BO14836 293 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-206ENST00000420121 FCN3O75636 299 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 SPARCP09486 303 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 RPS2P15880 293 aaKnown RBP9.21□□□□□ -0.94
SSBP3-206ENST00000420121 CPT2P23786 658 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 CFPP27918 469 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 PSMB10P40306 273 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 MALLQ13021 153 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 MRPL21Q7Z2W9 205 aaKnown RBP9.21□□□□□ -0.94
SSBP3-206ENST00000420121 BCL6BQ8N143 479 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-206ENST00000420121 C19orf18Q8NEA5 215 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 CANT1Q8WVQ1 401 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 ERGIC1Q969X5 290 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 NEIL1Q96FI4 390 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-206ENST00000420121 AMELYQ99218 206 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 KCNJ15Q99712 375 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 CHID1Q9BWS9 393 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 SSBP3Q9BWW4 388 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-206ENST00000420121 UFSP2Q9NUQ7 469 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 FAM53CQ9NYF3 392 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 ZNF319Q9P2F9 582 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 CTSZQ9UBR2 303 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 MIOXQ9UGB7 285 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 NUP50Q9UKX7 468 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 PPIAL4AQ9Y536 164 aa9.21□□□□□ -0.94
SSBP3-206ENST00000420121 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 AQP12BA6NM10 295 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms