RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 IGLV1-36A0A0B4J1U3 117 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 DHRS12A0PJE2 317 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 VWC2LB2RUY7 222 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 INAFM1C9JVW0 142 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 GYG2O15488 501 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 SGCEO43556 437 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 DOK2O60496 412 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 MPZL1O95297 269 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 CLPTM1O96005 669 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 RENP00797 406 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 CSTBP04080 98 aaKnown RBP5.9□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF250P15622 560 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 HIST1H1CP16403 213 aaKnown RBP5.9□□□□□ -1.46
HMGN1-205ENST00000419378 EGR1P18146 543 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 CRABP1P29762 137 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 RAD52P43351 418 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 UCP2P55851 309 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 KLF3P57682 345 aaPredicted RBP5.9□□□□□ -1.46
HMGN1-205ENST00000419378 GLO1Q04760 184 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 LOXL1Q08397 574 aaPredicted RBP5.9□□□□□ -1.46
HMGN1-205ENST00000419378 TRAP1Q12931 704 aaKnown RBP5.9□□□□□ -1.46
HMGN1-205ENST00000419378 AQP6Q13520 282 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 ALKBH6Q3KRA9 238 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 CLEC12AQ5QGZ9 265 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 SPATA46Q5T0L3 261 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 RPL13AP3Q6NVV1 102 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 DNM1P34Q6PK57 102 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 AQP12AQ8IXF9 295 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 OR6V1Q8N148 313 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 ATG16L2Q8NAA4 619 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 AQP11Q8NBQ7 271 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 SDR9C7Q8NEX9 313 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 OR52L1Q8NGH7 329 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 OR8D4Q8NGM9 314 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 OR1J1Q8NGS3 322 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 OR4K13Q8NH42 304 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 SYNPRQ8TBG9 265 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 C11orf40Q8WZ69 217 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 TSSK2Q96PF2 358 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 SNX18Q96RF0 628 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 NMNAT3Q96T66 252 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 PIMREGQ9BSJ6 248 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 WACQ9BTA9 647 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 PLA2G12AQ9BZM1 189 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 BCL2L14Q9BZR8 327 aa5.9□□□□□ -1.46
HMGN1-205ENST00000419378 RPRD1BQ9NQG5 326 aaKnown RBP5.9□□□□□ -1.46
HMGN1-205ENST00000419378 EIF3KQ9UBQ5 218 aaKnown RBP5.9□□□□□ -1.46
HMGN1-205ENST00000419378 CHD3Q12873 2000 aaKnown RBP5.89□□□□□ -1.47
HMGN1-205ENST00000419378 IGHV4-61A0A0C4DH41 118 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 OR6C68A6NDL8 312 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 OR6C6A6NF89 314 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 DCTN6O00399 190 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 BHLHE40O14503 412 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 IDH3BO43837 385 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 CD5LO43866 347 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 CST1P01037 141 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 NGFP01138 241 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 COX5BP10606 129 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 USF1P22415 310 aaPredicted RBP5.89□□□□□ -1.47
HMGN1-205ENST00000419378 MPV17P39210 176 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 NR4A2P43354 598 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 HTR5AP47898 357 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 CENPAP49450 140 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 SELENOVP59797 346 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 PPP1CBP62140 327 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 LSM6P62312 80 aaKnown RBP5.89□□□□□ -1.47
HMGN1-205ENST00000419378 PPP2R2BQ00005 443 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGN1-205ENST00000419378 BNIP1Q12981 228 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 CCNIQ14094 377 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 FLOT2Q14254 428 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 GGTLC2Q14390 218 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 GK3PQ14409 553 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 MEP1BQ16820 701 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 MICAQ29983 383 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 TMEM249Q2WGJ8 235 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 CCDC92Q53HC0 331 aaPredicted RBP5.89□□□□□ -1.47
HMGN1-205ENST00000419378 TMEM255AQ5JRV8 349 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 ELFN2Q5R3F8 820 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 MZT2AQ6P582 158 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 UNQ6126/PRO20091Q6UXV3 157 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 RASSF6Q6ZTQ3 369 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.89□□□□□ -1.47
HMGN1-205ENST00000419378 SPATA24Q86W54 205 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF786Q8N393 782 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 LNX2Q8N448 690 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 SLC26A10Q8NG04 563 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 OR10G2Q8NGC3 310 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 OR52E2Q8NGJ4 325 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 SLC25A40Q8TBP6 338 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 CANT1Q8WVQ1 401 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 GTF3AQ92664 365 aaKnown RBP5.89□□□□□ -1.47
HMGN1-205ENST00000419378 C4orf45Q96LM5 186 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 CHID1Q9BWS9 393 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 DGCR6LQ9BY27 220 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 OR2J1Q9GZK6 312 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 BPESC1Q9GZL8 116 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 RACGAP1Q9H0H5 632 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 SLC25A32Q9H2D1 315 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms