RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ADGRG5Q8IZF4 528 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 BCL6BQ8N143 479 aaPredicted RBP12.63□□□□□ -0.39
UBXN4-203ENST00000416538 C1orf147Q96MC9 270 aaPredicted RBP12.63□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF48Q96MX3 618 aaPredicted RBP12.63□□□□□ -0.39
UBXN4-203ENST00000416538 CDADC1Q9BWV3 514 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 MUC13Q9H3R2 512 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 MED20Q9H944 212 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 TAS2R1Q9NYW7 299 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF69Q9UC07 566 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 SOX21Q9Y651 276 aaPredicted RBP12.63□□□□□ -0.39
UBXN4-203ENST00000416538 FAM183AA6NL82 134 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 CD300LBA8K4G0 201 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 RPS2P15880 293 aaKnown RBP12.62□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF823P16415 610 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 CALB2P22676 271 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 CA6P23280 308 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 CD80P33681 288 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 CD200P41217 278 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 ENTPD1P49961 510 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 MNAT1P51948 309 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 SLC25A1P53007 311 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 TPTEP56180 551 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 ESCO2Q56NI9 601 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 SLC27A4Q6P1M0 643 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 LYPD2Q6UXB3 125 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 SPATC1Q76KD6 591 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 MRPL21Q7Z2W9 205 aaKnown RBP12.62□□□□□ -0.39
UBXN4-203ENST00000416538 KLBQ86Z14 1044 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 ARHGAP24Q8N264 748 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 MUC20Q8N307 709 aaPredicted RBP12.62□□□□□ -0.39
UBXN4-203ENST00000416538 LINC00471Q8N535 108 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 OR10G2Q8NGC3 310 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 Q8TCH9 128 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 SLAMF6Q96DU3 332 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 ASB9Q96DX5 294 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 AMELYQ99218 206 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 REEP1Q9H902 201 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 UFSP2Q9NUQ7 469 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 TMEM100Q9NV29 134 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 LRCH1Q9Y2L9 728 aa12.62□□□□□ -0.39
UBXN4-203ENST00000416538 FCN3O75636 299 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 PTBP3O95758 552 aaKnown RBP12.61□□□□□ -0.39
UBXN4-203ENST00000416538 IGHV4-38-2P0DP08 117 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 CFPP27918 469 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 PRKXP51817 358 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 SCGB2A2Q13296 93 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 PGAP1Q75T13 922 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 HS3ST5Q8IZT8 346 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 BPIFB2Q8N4F0 458 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 TEX29Q8N6K0 151 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 CCDC197Q8NCU1 140 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 OR2T33Q8NG76 320 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 FAM216AQ8WUB2 273 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 POP5Q969H6 163 aaKnown RBP12.61□□□□□ -0.39
UBXN4-203ENST00000416538 COPS4Q9BT78 406 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 ADAT1Q9BUB4 502 aaKnown RBP12.61□□□□□ -0.39
UBXN4-203ENST00000416538 SSBP3Q9BWW4 388 aaPredicted RBP12.61□□□□□ -0.39
UBXN4-203ENST00000416538 CTSZQ9UBR2 303 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 PRPF19Q9UMS4 504 aaKnown RBP12.61□□□□□ -0.39
UBXN4-203ENST00000416538 PPIAL4AQ9Y536 164 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 AUP1Q9Y679 476 aa12.61□□□□□ -0.39
UBXN4-203ENST00000416538 IGHV3OR16-10A0A075B7F0 116 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 DHRS12A0PJE2 317 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 IFNL4K9M1U5 179 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 UBA52P62987 128 aaKnown RBP12.6□□□□□ -0.39
UBXN4-203ENST00000416538 ACTG1P63261 375 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 PAX8Q06710 450 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 MALLQ13021 153 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 FAM98BQ52LJ0 330 aaKnown RBP12.6□□□□□ -0.39
UBXN4-203ENST00000416538 ARMCX4Q5H9R4 360 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 DRAM2Q6UX65 266 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 PRSS45Q7RTY3 260 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 WDR86Q86TI4 376 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 CELF2-AS1Q8N7Q2 184 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 SIGLECL1Q8N7X8 197 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 OR6K6Q8NGW6 343 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 SPTSSAQ969W0 71 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 DUX5Q96PT3 197 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 FEVQ99581 238 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 SUCNR1Q9BXA5 334 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 PPP1R3EQ9H7J1 279 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 CMC2Q9NRP2 79 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 OR5V1Q9UGF6 321 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 BAIAP2Q9UQB8 552 aa12.6□□□□□ -0.39
UBXN4-203ENST00000416538 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 TMEM89A2RUT3 159 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 C22orf46C9J442 243 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF878C9JN71 531 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF593O00488 134 aaPredicted RBP12.59□□□□□ -0.39
UBXN4-203ENST00000416538 FSTL3O95633 263 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 RAP2AP10114 183 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 FMO3P31513 532 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 COMPP49747 757 aaPredicted RBP12.59□□□□□ -0.39
UBXN4-203ENST00000416538 OR8G1Q15617 311 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 KLHL12Q53G59 568 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 CD300LDQ6UXZ3 194 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 C12orf54Q6X4T0 127 aa12.59□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF841Q6ZN19 808 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms