RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CARTPTQ16568 116 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 LRRN1Q6UXK5 716 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 BCDIN3DQ7Z5W3 292 aaKnown RBP12.49□□□□□ -0.41
LIMS1-206ENST00000414829 KLBQ86Z14 1044 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 DHRSXQ8N5I4 330 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 OR8G5Q8NG78 346 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 C10orf105Q8TEF2 133 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 SPSB4Q96A44 273 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 PGAM5Q96HS1 289 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 OR8B4Q96RC9 309 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 HSPE1-MOB4S4R3N1 261 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 AKAP9Q99996 3911 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 IRGMA1A4Y4 181 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 GGT3PA6NGU5 568 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 ZSCAN5BA6NJL1 495 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 H0YAE9 185 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 H7C1Q1 480 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 SPRY3O43610 288 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 SULT1C4O75897 302 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 IGHV1-46P01743 117 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 GIFP27352 417 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 TNFAIP6P98066 277 aaPredicted RBP12.48□□□□□ -0.41
LIMS1-206ENST00000414829 CDK5R2Q13319 367 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 TNK1Q13470 666 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 HLXQ14774 488 aaPredicted RBP12.48□□□□□ -0.41
LIMS1-206ENST00000414829 SNAI3Q3KNW1 292 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 ALKBH6Q3KRA9 238 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 USP51Q70EK9 711 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 FAM57BQ71RH2 274 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 BIVMQ86UB2 503 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 ENTHD1Q8IYW4 607 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 OR10H4Q8NGA5 316 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 RHOXF1Q8NHV9 184 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 CYGBQ8WWM9 190 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 AMELYQ99218 206 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
LIMS1-206ENST00000414829 POFUT1Q9H488 388 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 ABCB9Q9NP78 766 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 MRPL15Q9P015 296 aaKnown RBP12.48□□□□□ -0.41
LIMS1-206ENST00000414829 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
LIMS1-206ENST00000414829 RPL36Q9Y3U8 105 aaKnown RBP12.48□□□□□ -0.41
LIMS1-206ENST00000414829 IGHV1-69-2A0A0G2JMI3 117 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.47□□□□□ -0.41
LIMS1-206ENST00000414829 TMEM269A0A1B0GVZ9 245 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 TRIM64A6NGJ6 449 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 TRIM64BA6NI03 449 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 H0YJX3 145 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 ENTPD6O75354 484 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 FADS2O95864 444 aaKnown RBP12.47□□□□□ -0.41
LIMS1-206ENST00000414829 HEXAP06865 529 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 INHBBP09529 407 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 SLC2A1P11166 492 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 SRP9P49458 86 aaKnown RBP12.47□□□□□ -0.41
LIMS1-206ENST00000414829 MMP16P51512 607 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 TMEM33P57088 247 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 ACTA2P62736 377 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 ACTG2P63267 376 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 CCL8P80075 99 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 IL5RAQ01344 420 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 HFEQ30201 348 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 GLYATL3Q5SZD4 288 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 OR2T2Q6IF00 324 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 PLEKHG7Q6ZR37 379 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF771Q7L3S4 317 aaPredicted RBP12.47□□□□□ -0.41
LIMS1-206ENST00000414829 EGFL6Q8IUX8 553 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 ZCCHC24Q8N2G6 241 aaKnown RBP12.47□□□□□ -0.41
LIMS1-206ENST00000414829 SPERTQ8NA61 448 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 CSNK2A3Q8NEV1 391 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 OR2Z1Q8NG97 314 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 RNFT2Q96EX2 444 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 REEP6Q96HR9 211 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 SLC30A2Q9BRI3 323 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 REG4Q9BYZ8 158 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 MSL2Q9HCI7 577 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 INPP5EQ9NRR6 644 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 IL19Q9UHD0 177 aa12.47□□□□□ -0.41
LIMS1-206ENST00000414829 IGHV4-30-2A0A087WSY4 118 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 A0A0U1RQV5 110 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 ANKRD30BLA7E2S9 258 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 CLDN25C9JDP6 229 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 ATP6V1B1P15313 513 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 USF1P22415 310 aaPredicted RBP12.46□□□□□ -0.41
LIMS1-206ENST00000414829 CAPGP40121 348 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 NR4A2P43354 598 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 MAGEB1P43366 347 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF92Q03936 586 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 LOXL1Q08397 574 aaPredicted RBP12.46□□□□□ -0.41
LIMS1-206ENST00000414829 RAB40BQ12829 278 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 MED21Q13503 144 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF691Q5VV52 312 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 PRSS45Q7RTY3 260 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 PEG10Q86TG7 708 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms