RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 S100ZQ8WXG8 99 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TFAP2BQ92481 460 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ART4Q93070 314 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 IL22RA2Q969J5 263 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 P2RY11Q96G91 374 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 REEP6Q96HR9 211 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 BTF3L4Q96K17 158 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CAPNS2Q96L46 248 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 DNAJC30Q96LL9 226 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 CNBD2Q96M20 576 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 KLHL32Q96NJ5 620 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 DEFB118Q96PH6 123 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 UHRF2Q96PU4 802 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SIGMAR1Q99720 223 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 OR11A1Q9GZK7 315 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SLC25A51Q9H1U9 297 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 MAP1LC3AQ9H492 121 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 RHOJQ9H4E5 214 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SLC7A10Q9NS82 523 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM38BQ9NVV0 291 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SPANXCQ9NY87 97 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ELOVL5Q9NYP7 299 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 ARMCX1Q9P291 453 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 B3GAT1Q9P2W7 334 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 SAMD4AQ9UPU9 718 aaKnown RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 C14orf166Q9Y224 244 aaKnown RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TCF19Q9Y242 345 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 LSM4Q9Y4Z0 139 aaKnown RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 RTEL1-TNFRSF6BF6WH68 1400 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 TRAPPC8Q9Y2L5 1435 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 PSME4Q14997 1843 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 WNK3Q9BYP7 1800 aa3.16□□□□□ -1.9
SF3B1-203ENST00000414174 EIF4G3O43432 1585 aaKnown RBP3.16□□□□□ -1.9
SF3B1-203ENST00000414174 KIF1BO60333 1816 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TRAV30A0A087WSZ9 112 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 A0A087WX48 190 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TCRBV7S2A1N4TA0A589 114 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ANKRD20A5PA0PJZ0 165 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CXorf65A6NEN9 183 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 FAM159BA6NKW6 160 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CLDN25C9JDP6 229 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 MANBAO00462 879 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 DVL1O14640 695 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CCL25O15444 150 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TAPBPO15533 448 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 PPIHO43447 177 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 EIF4E2O60573 245 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 EML2O95834 649 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 MT-CO3P00414 261 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 IFNA7P01567 189 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 VTNP04004 478 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 NGFRP08138 427 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 IL6RP08887 468 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR13C7P0DN81 318 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM225BP0DP42 221 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 VSIG10L2P0DP72 767 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 RAB3BP20337 219 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TAC1P20366 129 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ZFP36P26651 326 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 IL12AP29459 219 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 HPCAL1P37235 193 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ETV6P41212 452 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 GLP1RP43220 463 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 METAP2P50579 478 aaKnown RBP eCLIP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CRISP1P54107 249 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 DVL1P1P54792 670 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 LOXL3P58215 753 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 RAB8AP61006 207 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 SNRPEP62304 92 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 RHOBP62745 196 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 SELENOWP63302 87 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 MRPS21P82921 87 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OC90Q02509 493 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ST3GAL1Q11201 340 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF234Q14588 700 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF235Q14590 738 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 GINS1Q14691 196 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 SLC10A1Q14973 349 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 SNRNP35Q16560 246 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TCTN1Q2MV58 587 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TRMT5Q32P41 509 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CYBRD1Q53TN4 286 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 Q5BKY6 102 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR10J3Q5JRS4 329 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 AKR1C8PQ5T2L2 129 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 HIST2H2BCQ6DN03 193 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 HIST2H2BDQ6DRA6 164 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 LAMTOR1Q6IAA8 161 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 PAMR1Q6UXH9 720 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 LRRC55Q6ZSA7 311 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 FA2HQ7L5A8 372 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 SHFQ7M4L6 423 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 FAM19A5Q7Z5A7 132 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 FAM19A1Q7Z5A9 133 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CCDC190Q86UF4 302 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 HAPLN4Q86UW8 402 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TCTE3Q8IZS6 198 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CA13Q8N1Q1 262 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ABHD12Q8N2K0 398 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 PNPLA1Q8N8W4 532 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms