RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 PRKXP51817 358 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 CDK5Q00535 292 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 RHOUQ7L0Q8 258 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 DPY19L4Q7Z388 723 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 NAA40Q86UY6 237 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 HS3ST5Q8IZT8 346 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 C1orf87Q8N0U7 546 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 CELF2-AS1Q8N7Q2 184 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 PRRG3Q9BZD7 231 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 OR51V1Q9H2C8 321 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 MARCH7Q9H992 704 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 SLC25A19Q9HC21 320 aa13.24□□□□□ -0.29
MCF2L-211ENST00000413354 PAPOLBQ9NRJ5 636 aaKnown RBP13.24□□□□□ -0.29
MCF2L-211ENST00000413354 GGT3PA6NGU5 568 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 CD300LBA8K4G0 201 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 F5H5P2 479 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 TMEM178BH3BS89 294 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 J3QLI3 93 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 PLPP2O43688 288 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 FOXH1O75593 365 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 PRKACGP22612 351 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 CPT2P23786 658 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 GATA4P43694 442 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 ZNF181Q2M3W8 571 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 SNAI3Q3KNW1 292 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 SLC35D3Q5M8T2 416 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 C1orf146Q5VVC0 180 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 PLBD1Q6P4A8 553 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 PARP8Q8N3A8 854 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 RFLNBQ8N5W9 214 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 OR5K1Q8NHB7 308 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 SPATA3Q8NHX4 192 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 RNF133Q8WVZ7 376 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 ERGIC1Q969X5 290 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 UTP4Q969X6 686 aaKnown RBP13.23□□□□□ -0.29
MCF2L-211ENST00000413354 SIGLEC11Q96RL6 698 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 REPIN1Q9BWE0 567 aaKnown RBP13.23□□□□□ -0.29
MCF2L-211ENST00000413354 G6PC2Q9NQR9 355 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 DCAF16Q9NXF7 216 aa13.23□□□□□ -0.29
MCF2L-211ENST00000413354 MXRA5Q9NR99 2828 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 ARHGAP32A7KAX9 2087 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 H0YL77 283 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 ANXA2P07355 339 aaKnown RBP13.22□□□□□ -0.29
MCF2L-211ENST00000413354 FCGR1AP12314 374 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 IRF2P14316 349 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 CD200P41217 278 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 CX3CR1P49238 355 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 ZNF92Q03936 586 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 MZT1Q08AG7 82 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 OR8G1Q15617 311 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 ATP6AP1Q15904 470 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 KLHL12Q53G59 568 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 GLYATL3Q5SZD4 288 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 DCAF12L2Q5VW00 463 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 FAHD2BQ6P2I3 314 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-211ENST00000413354 FAHD1Q6P587 224 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 SPATC1Q76KD6 591 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 LRRC28Q86X40 367 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-211ENST00000413354 TIGD4Q8IY51 512 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 ZNF454Q8N9F8 522 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 OR11L1Q8NGX0 322 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 FAHD2AQ96GK7 314 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 ABHD6Q9BV23 337 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 NTN4Q9HB63 628 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 PATZ1Q9HBE1 687 aaKnown RBP13.22□□□□□ -0.29
MCF2L-211ENST00000413354 MRPL15Q9P015 296 aaKnown RBP13.22□□□□□ -0.29
MCF2L-211ENST00000413354 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
MCF2L-211ENST00000413354 PPIAL4EA0A075B759 164 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 PPIAL4CA0A0B4J2A2 164 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 PPIAL4DF5H284 164 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 TBX1O43435 398 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 GMDSO60547 372 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 CIB2O75838 187 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 FSTL3O95633 263 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 HLA-DPB1P04440 258 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 LYNP07948 512 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 PPIAL4FP0DN26 164 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 SLC2A1P11166 492 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 CFL1P23528 166 aaKnown RBP13.21□□□□□ -0.29
MCF2L-211ENST00000413354 FASP25445 335 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 DDOSTP39656 456 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 CRISP1P54107 249 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 PRSS12P56730 875 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 RPS7P62081 194 aaKnown RBP13.21□□□□□ -0.29
MCF2L-211ENST00000413354 ESRRGP62508 458 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 ZMYND11Q15326 602 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 SNAPC1Q16533 368 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 TIGD6Q17RP2 521 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 LCN1P1Q5VSP4 162 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 LIPNQ5VXI9 398 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 ZNF771Q7L3S4 317 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-211ENST00000413354 MOGAT3Q86VF5 341 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 KLBQ86Z14 1044 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 CPOQ8IVL8 374 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 SPERTQ8NA61 448 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 OR52H1Q8NGJ2 320 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 OR2AE1Q8NHA4 323 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 OTOSQ8NHW6 89 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 Q8TCH9 128 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 ZMYND19Q96E35 227 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms