RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 PLEKHN1Q494U1 663 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-211ENST00000413186 NFAM1Q8NET5 270 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-211ENST00000413186 UBE2FQ969M7 185 aa7.63□□□□□ -1.19
SYNE1-211ENST00000413186 SLAMF6Q96DU3 332 aa7.63□□□□□ -1.19
SYNE1-211ENST00000413186 HYLS1Q96M11 299 aa7.63□□□□□ -1.19
SYNE1-211ENST00000413186 FOXB1Q99853 325 aa7.63□□□□□ -1.19
SYNE1-211ENST00000413186 FFAR1O14842 300 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 SLC2A10O95528 541 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 CRYAAP02489 173 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ERVFC1-1P60608 527 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 Q499Y3 187 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 CDCP2Q5VXM1 449 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 RNLSQ5VYX0 342 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 SERPINA12Q8IW75 414 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF679Q8IYX0 411 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 TMEM251Q8N6I4 163 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 PLA2G12AQ9BZM1 189 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 EMC7Q9NPA0 242 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 OR52A1Q9UKL2 312 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 RCE1Q9Y256 329 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 A6NIN4 97 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 AQP7P3A6NL99 342 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 RNF212BA8MTL3 300 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 TGFBR3LH3BV60 316 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 IL7P13232 177 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ANKRD34AQ69YU3 496 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 SLC22A25Q6T423 547 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 BCDIN3DQ7Z5W3 292 aaKnown RBP7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF584Q8IVC4 421 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 OR52H1Q8NGJ2 320 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 MOGAT1Q96PD6 335 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 NRIP3Q9NQ35 241 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 HAO2Q9NYQ3 351 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 GSKIPQ9P0R6 139 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 RALGAPA1Q6GYQ0 2036 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 EFSO43281 561 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 KLF7O75840 302 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-211ENST00000413186 TP53P04637 393 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-211ENST00000413186 CSF1P09603 554 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 SELEP16581 610 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 VEGFCP49767 419 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 CD83Q01151 205 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 AQP6Q13520 282 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 AGAP6Q5VW22 663 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 C11orf40Q8WZ69 217 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 SLC25A46Q96AG3 418 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 TMEM246Q9BRR3 403 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 SCPEP1Q9HB40 452 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ETV7Q9Y603 341 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 NDUFS8O00217 210 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 TRAPPC2P0DI81 140 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 TRAPPC2BP0DI82 140 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 PPP3CBP16298 524 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ACHEP22303 614 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 NHLH1Q02575 133 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF616Q08AN1 781 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ZMAT1Q5H9K5 638 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF684Q5T5D7 378 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 LIPNQ5VXI9 398 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 AWAT2Q6E213 333 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 VASH1Q7L8A9 365 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-211ENST00000413186 CISD2Q8N5K1 135 aaKnown RBP7.62□□□□□ -1.19
SYNE1-211ENST00000413186 SEMA6DQ8NFY4 1073 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 OR52N5Q8NH56 324 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 CORO2AQ92828 525 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 GHSRQ92847 366 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 HGDQ93099 445 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 ATF6BQ99941 703 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 DPCDQ9BVM2 203 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-211ENST00000413186 PCNX2A6NKB5 2137 aa7.62□□□□□ -1.19
SYNE1-211ENST00000413186 SMIM30A4D0T7 59 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 HELTA6NFD8 242 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 UBL3O95164 117 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 IGF2P01344 180 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 RAF1P04049 648 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 CD3GP09693 182 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 TMIGD3P0DMS9 266 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ETV6P41212 452 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SEC61A1P61619 476 aaKnown RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 IZUMO4Q1ZYL8 232 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 RTL6Q6ICC9 239 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 MKXQ8IYA7 352 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ADPRHL1Q8NDY3 354 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ABHD4Q8TB40 342 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF431Q8TF32 576 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 LIPHQ8WWY8 451 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SNX18Q96RF0 628 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 THAP7Q9BT49 309 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 HES7Q9BYE0 225 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ADAM19Q9H013 955 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 ATG5Q9H1Y0 275 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 OBP2BQ9NPH6 170 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 POLE4Q9NR33 117 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 MAB21L2Q9Y586 359 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 CACNG2Q9Y698 323 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 SPENQ96T58 3664 aaKnown RBP7.61□□□□□ -1.19
SYNE1-211ENST00000413186 LY6G6EA0A0G2JKS1 128 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 CENPVL1A0A0U1RR11 272 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 CTDSP2O14595 271 aa7.61□□□□□ -1.19
SYNE1-211ENST00000413186 NME2P1O60361 137 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms