RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ZNF679Q8IYX0 411 aa11.95□□□□□ -0.5
COL6A2-204ENST00000409416 UBALD1Q8TB05 177 aa11.95□□□□□ -0.5
COL6A2-204ENST00000409416 SCARB1Q8WTV0 552 aa11.95□□□□□ -0.5
COL6A2-204ENST00000409416 TMEM234Q8WY98 164 aa11.95□□□□□ -0.5
COL6A2-204ENST00000409416 CMTM3Q96MX0 182 aa11.95□□□□□ -0.5
COL6A2-204ENST00000409416 UPB1Q9UBR1 384 aa11.95□□□□□ -0.5
COL6A2-204ENST00000409416 EML5Q05BV3 1969 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 MED19A0JLT2 244 aaPredicted RBP11.94□□□□□ -0.5
COL6A2-204ENST00000409416 DBHP09172 617 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 CPN1P15169 458 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 AVPR2P30518 371 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 CCR5P51681 352 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 MYBPHQ13203 477 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL6A2-204ENST00000409416 ZNF600Q6ZNG1 722 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 ANGPTL5Q86XS5 388 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 LRRC75AQ8NAA5 344 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 ROBO4Q8WZ75 1007 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 PNPLA2Q96AD5 504 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 ALKBH3Q96Q83 286 aaPredicted RBP11.94□□□□□ -0.5
COL6A2-204ENST00000409416 SMIM3Q9BZL3 60 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 GPR160Q9UJ42 338 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 OR52A1Q9UKL2 312 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 LDOC1O95751 146 aaPredicted RBP11.94□□□□□ -0.5
COL6A2-204ENST00000409416 IL5P05113 134 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 LAP3P28838 519 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 OR3A2P47893 321 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 TAS2R19P59542 299 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 EGR3Q06889 387 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 RNASE10Q5GAN6 216 aaKnown RBP11.94□□□□□ -0.5
COL6A2-204ENST00000409416 OR1N1Q8NGS0 311 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 RHBDD1Q8TEB9 315 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 ZNF75AQ96N20 296 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 ZNF416Q9BWM5 594 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 SERINC1Q9NRX5 453 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 HHLA2Q9UM44 414 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 MRPS18BQ9Y676 258 aaKnown RBP11.94□□□□□ -0.5
COL6A2-204ENST00000409416 PCNX2A6NKB5 2137 aa11.94□□□□□ -0.5
COL6A2-204ENST00000409416 OR2M5A3KFT3 312 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 PMS2P1A4D2B8 440 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 NPIPA2E9PIF3 369 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 F5H0A9 414 aaPredicted RBP11.93□□□□□ -0.5
COL6A2-204ENST00000409416 NPIPA3F8WFD2 350 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 SLC17A2O00624 439 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 GABRA1P14867 456 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 DCDP81605 110 aaKnown RBP11.93□□□□□ -0.5
COL6A2-204ENST00000409416 SEZ6L2Q6UXD5 910 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 OR52N4Q8NGI2 321 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 C11orf40Q8WZ69 217 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 CLDN16Q9Y5I7 305 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 PRSS44E7EML9 344 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 HOXB5P09067 269 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 QDPRP09417 244 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 GLB1P16278 677 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 POLR2GP62487 172 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL6A2-204ENST00000409416 PMPCAQ10713 525 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 TRAPPC6BQ86SZ2 158 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 GPX7Q96SL4 187 aaPredicted RBP11.93□□□□□ -0.5
COL6A2-204ENST00000409416 MRPL22Q9NWU5 206 aaKnown RBP11.93□□□□□ -0.5
COL6A2-204ENST00000409416 KIF25Q9UIL4 384 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 A0A096LPE4 126 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 A0A1W2PPZ6 126 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 TMEM225BP0DP42 221 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 FASLGP48023 281 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 CSRP2Q16527 193 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 SLC36A1Q7Z2H8 476 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 ZBTB8AQ96BR9 441 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 TMPRSS13Q9BYE2 586 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 EVA1AQ9H8M9 152 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 HPF1Q9NWY4 346 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 KCNMB2Q9Y691 235 aa11.93□□□□□ -0.5
COL6A2-204ENST00000409416 OR2AT4A6NND4 320 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 LAMTOR5O43504 91 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 DLSTP36957 453 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 CAPZA1P52907 286 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 EXD3Q8N9H8 876 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 ASB5Q8WWX0 329 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 SLAMF6Q96DU3 332 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 SEH1LQ96EE3 360 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 DMRTA2Q96SC8 542 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 METTL8Q9H825 291 aaKnown RBP11.92□□□□□ -0.5
COL6A2-204ENST00000409416 TRBV5-7A0A0A0MS05 114 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 A0A1W2PQM1 296 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 FAM166BA8MTA8 275 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 OPRM1P35372 400 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 CLEC9AQ6UXN8 241 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 VRK1Q99986 396 aaPredicted RBP11.92□□□□□ -0.5
COL6A2-204ENST00000409416 NICN1Q9BSH3 213 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 ZNF768Q9H5H4 540 aaKnown RBP11.92□□□□□ -0.5
COL6A2-204ENST00000409416 NCOA6Q14686 2063 aaPredicted RBP11.92□□□□□ -0.5
COL6A2-204ENST00000409416 ATRXP46100 2492 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 SLC22A23A1A5C7 686 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 OR5H14A6NHG9 310 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 PHYHO14832 338 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 OR2A4O95047 310 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 LCATP04180 440 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 CD1AP06126 327 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 TCN2P20062 427 aa11.92□□□□□ -0.5
COL6A2-204ENST00000409416 C3AR1Q16581 482 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms