RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 CADP27708 2225 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 MYO18BQ8IUG5 2567 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 OR4C45A6NMZ5 311 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 H3BSA7 217 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 PLAUP00749 431 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 IGLV3-1P01715 115 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 TTRP02766 147 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 ISG15P05161 165 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 CFL1P23528 166 aaKnown RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 KIR3DL2P43630 455 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 MLLT11Q13015 90 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 SNTB2Q13425 540 aaKnown RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 TPBGQ13641 420 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 CDK5R1Q15078 307 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF718Q3SXZ3 478 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 GLYATL3Q5SZD4 288 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 SYT6Q5T7P8 510 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 BCL2L15Q5TBC7 163 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 TMEM244Q5VVB8 128 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 DMKNQ6E0U4 476 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 XAF1Q6GPH4 301 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 RGS7BPQ6MZT1 257 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 FBXW12Q6X9E4 464 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 RFPL4BQ6ZWI9 263 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 CCDC54Q8NEL0 328 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 LILRB1Q8NHL6 650 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 SLC25A40Q8TBP6 338 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 AKAP1Q92667 903 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 MARS2Q96GW9 593 aaKnown RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 REPIN1Q9BWE0 567 aaKnown RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 MRPS26Q9BYN8 205 aaKnown RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 OR51B6Q9H340 312 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 OPA3Q9H6K4 179 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF442Q9H7R0 627 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 VCX3AQ9NNX9 186 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 PLEKHB1Q9UF11 243 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 POU2F3Q9UKI9 436 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 GTF2A1LQ9UNN4 478 aa10.6□□□□□ -0.71
LINC00339-201ENST00000404210 SIRT4Q9Y6E7 314 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-201ENST00000404210 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-201ENST00000404210 C5orf63A6NC05 138 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 TMEM212A6NML5 194 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 E7EQL1 145 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 HSMCR30P0CW71 290 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 SMIM18P0DKX4 95 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 RAC2P15153 192 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 ATP6V1B1P15313 513 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF250P15622 560 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 CPEP16870 476 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 CELP19835 753 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 GCH1P30793 250 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 APOBEC3AP31941 199 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-201ENST00000404210 THBS4P35443 961 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF92Q03936 586 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 DOC2BQ14184 412 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 GK2Q14410 553 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-201ENST00000404210 TIGD6Q17RP2 521 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 ZNF672Q499Z4 452 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-201ENST00000404210 ARMCX4Q5H9R4 360 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 MBNL2Q5VZF2 373 aaKnown RBP10.59□□□□□ -0.71
LINC00339-201ENST00000404210 Q6ZSR3 168 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 PLPP7Q8NBV4 271 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 KBTBD8Q8NFY9 601 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 OR5AK2Q8NH90 309 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 TMEM171Q8WVE6 324 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 HAVCR1Q96D42 359 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 SMIM19Q96E16 107 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 C14orf79Q96F83 325 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 REEP6Q96HR9 211 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 DHRS9Q9BPW9 319 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 OR2J1Q9GZK6 312 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 COMMD4Q9H0A8 199 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 POFUT1Q9H488 388 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 CA10Q9NS85 328 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 CISD1Q9NZ45 108 aaKnown RBP10.59□□□□□ -0.71
LINC00339-201ENST00000404210 PTTG3PQ9NZH4 202 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 CMAHPQ9Y471 501 aa10.59□□□□□ -0.71
LINC00339-201ENST00000404210 ICE1Q9Y2F5 2266 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 A0A1B0GTI1 187 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 LOC390937A0A1W2PQ73 354 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 GPRIN2O60269 458 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 MTRF1O75570 445 aaKnown RBP10.58□□□□□ -0.72
LINC00339-201ENST00000404210 CTAG2O75638 210 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 INMTO95050 263 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 ZFPL1O95159 310 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 CLPTM1O96005 669 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 UBCP0CG48 685 aaKnown RBP10.58□□□□□ -0.72
LINC00339-201ENST00000404210 SELEP16581 610 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 ZNF12P17014 697 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 CD53P19397 219 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 CCL1P22362 96 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 ANOS1P23352 680 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 COL8A1P27658 744 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 DDOSTP39656 456 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 EVX1P49640 407 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 FABP6P51161 128 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 SELENOVP59797 346 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 ERVS71-1P61550 626 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 FAM3AP98173 230 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 TLE4Q04727 773 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms