RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 C15orf40Q8WUR7 153 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 PIH1D2Q8WWB5 315 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 RGP1Q92546 391 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 SGTBQ96EQ0 304 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 OPALINQ96PE5 141 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF382Q96SR6 550 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 MYOZ1Q9NP98 299 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 MYOZ2Q9NPC6 264 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 DYRK4Q9NR20 520 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF355PQ9NSJ1 428 aa2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 YTHDF2Q9Y5A9 579 aaKnown RBP2.37□□□□□ -2.03
HMGB1P17-201ENST00000403495 NEURL4Q96JN8 1562 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGKV2D-24A0A075B6R9 120 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 A0A0J9YXV3 536 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 A0A1W2PNU3 283 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 A0A1W2PRD5 423 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 H7C0C1 242 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 RNF113AO15541 343 aaKnown RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 MED6O75586 246 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 HPRT1P00492 218 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 DTYMKP23919 212 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 GABRR2P28476 465 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 GGT2P36268 569 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 FABP6P51161 128 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 PSMD4P55036 377 aaKnown RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF121P58317 390 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 RPL23P62829 140 aaKnown RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 XIAPP98170 497 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 LOXL1Q08397 574 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 NCF4Q15080 339 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF829Q3KNS6 432 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF684Q5T5D7 378 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 MLIPQ5VWP3 458 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 SLC25A25Q6KCM7 469 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 MRPL21Q7Z2W9 205 aaKnown RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 APRG1Q8IVJ8 170 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 MYOCDQ8IZQ8 938 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF645Q8N7E2 425 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 ASCC1Q8N9N2 400 aaKnown RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 DRAXINQ8NBI3 349 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 TMEM104Q8NE00 496 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR52P1PQ8NH57 321 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 COQ8AQ8NI60 647 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 TOP1MTQ969P6 601 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 PTX4Q96A99 478 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 ISOC2Q96AB3 205 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 FLYWCH2Q96CP2 140 aaKnown RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 SEH1LQ96EE3 360 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 C9orf72Q96LT7 481 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 SCGB3A2Q96PL1 93 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 PARP12Q9H0J9 701 aaKnown RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR52D1Q9H346 318 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 GAL3ST2Q9H3Q3 398 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZC4H2Q9NQZ6 224 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 IFNKQ9P0W0 207 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 EIF4G1Q04637 1599 aaKnown RBP2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 TMEM94Q12767 1356 aa2.36□□□□□ -2.03
HMGB1P17-201ENST00000403495 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGKV6D-21A0A0A0MT36 114 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 ANKRD65E5RJM6 399 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 PSMD11O00231 422 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 POLR3GO15318 223 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 MAGEB4O15481 346 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 CDC40O60508 579 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 MPDU1O75352 247 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF324O75467 553 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 HSBP1O75506 76 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 FARS2O95363 451 aaKnown RBP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 NPPAP01160 153 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGKV3-11P04433 115 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 CTSLP07711 333 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR8U9P0C7N5 309 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR56A5P0C7T3 313 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 PMCHP20382 165 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 CD70P32970 193 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 RBM34P42696 430 aaKnown RBP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 LINC00315P59091 139 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 PFN3P60673 137 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 LCN2P80188 198 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 CDK5Q00535 292 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 IRF4Q15306 451 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 LIN9Q5TKA1 542 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 FBXW9Q5XUX1 488 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 SNX20Q7Z614 316 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 CALHM1Q8IU99 346 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 SAXO1Q8IYX7 474 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 TCAIMQ8N3R3 496 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR4K5Q8NGD3 323 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR51L1Q8NGJ5 315 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR6N1Q8NGY5 312 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 NAT6Q93015 286 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 CIDECQ96AQ7 238 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 TMIGD2Q96BF3 282 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 HSD17B10Q99714 261 aaKnown RBP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 FGF23Q9GZV9 251 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 TMEM27Q9HBJ8 222 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 HMG20AQ9NP66 347 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 RGS18Q9NS28 235 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 MCUBQ9NWR8 336 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNRD1Q9P1U0 126 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms