RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 UBTD1Q9HAC8 227 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 MYEF2Q9P2K5 600 aaKnown RBP13.68□□□□□ -0.22
HMGA1-204ENST00000401473 SLC22A13Q9Y226 551 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 CAB39Q9Y376 341 aaPredicted RBP13.68□□□□□ -0.22
HMGA1-204ENST00000401473 R4GMQ9 66 aa13.68□□□□□ -0.22
HMGA1-204ENST00000401473 CD8AP01732 235 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 SOD3P08294 240 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 TACSTD2P09758 323 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 EEF1B2P24534 225 aaKnown RBP13.67□□□□□ -0.22
HMGA1-204ENST00000401473 SERPINF1P36955 418 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
HMGA1-204ENST00000401473 NANOS3P60323 173 aaKnown RBP13.67□□□□□ -0.22
HMGA1-204ENST00000401473 IRF3Q14653 427 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 ALKBH6Q3KRA9 238 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 GLYATL3Q5SZD4 288 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 RNLSQ5VYX0 342 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 UNQ6126/PRO20091Q6UXV3 157 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 PRSS35Q8N3Z0 413 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 NANOGP1Q8N7R0 232 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF611Q8N823 705 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 OR8B12Q8NGG6 310 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 SOX7Q9BT81 388 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 YTHDF1Q9BYJ9 559 aaKnown RBP13.67□□□□□ -0.22
HMGA1-204ENST00000401473 PBOV1Q9GZY1 135 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 PTTG3PQ9NZH4 202 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 FRRS1LQ9P0K9 344 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 DUSP13Q9UII6 198 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 LRCH1Q9Y2L9 728 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 J3QW42 95 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 TBX1O43435 398 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 RGS10O43665 173 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 MT-ND2P03891 347 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 CDH15P55291 814 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 PSG7Q13046 419 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF544Q6NX49 715 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 PRSS48Q7RTY5 328 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 EGFL6Q8IUX8 553 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 MUC15Q8N387 334 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 MRPL24Q96A35 216 aaKnown RBP13.67□□□□□ -0.22
HMGA1-204ENST00000401473 SYT3Q9BQG1 590 aa13.67□□□□□ -0.22
HMGA1-204ENST00000401473 REPIN1Q9BWE0 567 aaKnown RBP13.67□□□□□ -0.22
HMGA1-204ENST00000401473 MAST4O15021 2626 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 IGLV3-9A0A075B6K5 115 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 LOC110117498-PIK3R3F6TDL0 507 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 TTRP02766 147 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF829Q3KNS6 432 aaPredicted RBP13.66□□□□□ -0.22
HMGA1-204ENST00000401473 ZNF718Q3SXZ3 478 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 WDR38Q5JTN6 314 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 MBNL2Q5VZF2 373 aaKnown RBP13.66□□□□□ -0.22
HMGA1-204ENST00000401473 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 CATSPERDQ86XM0 798 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 C1orf174Q8IYL3 243 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 KLHL36Q8N4N3 616 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 OR52H1Q8NGJ2 320 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 OR5L1Q8NGL2 311 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 OR2G2Q8NGZ5 317 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 CMBLQ96DG6 245 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 PGAM5Q96HS1 289 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 LYZL4Q96KX0 146 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 CCDC90BQ9GZT6 254 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 CHCHD3Q9NX63 227 aaKnown RBP13.66□□□□□ -0.22
HMGA1-204ENST00000401473 BABAM2Q9NXR7 383 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 NUFIP1Q9UHK0 495 aaKnown RBP13.66□□□□□ -0.22
HMGA1-204ENST00000401473 OR52A1Q9UKL2 312 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 BLOC1S6Q9UL45 172 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 GTF2A1LQ9UNN4 478 aa13.66□□□□□ -0.22
HMGA1-204ENST00000401473 SIRT4Q9Y6E7 314 aaPredicted RBP13.66□□□□□ -0.22
HMGA1-204ENST00000401473 ATE1O95260 518 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 TNK1Q13470 666 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 SWI5Q1ZZU3 235 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 FDX2Q6P4F2 183 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 TMPRSS11AQ6ZMR5 421 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 FAM220AQ7Z4H9 259 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 KLBQ86Z14 1044 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 OR52N1Q8NH53 320 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 SYNPRQ8TBG9 265 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 SPSB4Q96A44 273 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 HAVCR1Q96D42 359 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 COG8Q96MW5 612 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 OR5M11Q96RB7 305 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 LAMP3Q9UQV4 416 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 ERGIC3Q9Y282 383 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 SNX5Q9Y5X3 404 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 ACOD1A6NK06 481 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 MT-ND5P03915 603 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 TUBG1P23258 451 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 KIR3DL2P43630 455 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 MAP2K4P45985 399 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 RPS23P62266 143 aaKnown RBP13.65□□□□□ -0.22
HMGA1-204ENST00000401473 ODF4Q2M2E3 257 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 GFOD2Q3B7J2 385 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 ELMOD2Q8IZ81 293 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 RDH10Q8IZV5 341 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 OR51E1Q8TCB6 317 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 MRPL48Q96GC5 212 aaKnown RBP13.65□□□□□ -0.22
HMGA1-204ENST00000401473 LURAP1Q96LR2 239 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 OR10A2Q9H208 303 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 PLK3Q9H4B4 646 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms