RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 CD300AQ9UGN4 299 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 ZNF705GA8MUZ8 300 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 FUT6P51993 359 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 RFPL4BQ6ZWI9 263 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 SLC25A26Q70HW3 274 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 ACY3Q96HD9 319 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 RASL11BQ9BPW5 248 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 VN1R1Q9GZP7 353 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 ZFP64Q9NPA5 681 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 ZNF331Q9NQX6 463 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 IGHV5-51A0A0C4DH38 117 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 FAM221AA4D161 298 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 ELK1P19419 428 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 NKX2-1P43699 371 aaPredicted RBP10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 HCCSP53701 268 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 OR1F12Q8NHA8 337 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 ZCCHC14Q8WYQ9 949 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 GLRX2Q9NS18 164 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 NHSQ6T4R5 1651 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 OR7C2O60412 319 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 NME2P22392 152 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 APEX1P27695 318 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 BAGE3Q86Y29 109 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 BAGE2Q86Y30 109 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 ARHGEF39Q8N4T4 335 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 KCTD12Q96CX2 325 aaKnown RBP10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 SEH1LQ96EE3 360 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 OCIAD1Q9NX40 245 aa10.9□□□□□ -0.66
CACNA1C-213ENST00000399629 HPNP05981 417 aa10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 LGALS7P47929 136 aa10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 OR10P1Q8NGE3 313 aa10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 OLIG1Q8TAK6 271 aa10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 LINC00615Q96LM1 132 aaPredicted RBP10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 LYSMD1Q96S90 227 aa10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 ACOXLQ9NUZ1 547 aa10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 CACFD1Q9UGQ2 172 aa10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 R4GMQ9 66 aa10.9□□□□□ -0.67
CACNA1C-213ENST00000399629 FADS1O60427 444 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 COL9A1P20849 921 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 ABCD3P28288 659 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 PRDX4Q13162 271 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 EXOSC2Q13868 293 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 SYT6Q5T7P8 510 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 ACSM6Q6P461 480 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 LINC01465Q8N7H1 131 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 OR5D13Q8NGL4 314 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 OR5B3Q8NH48 314 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 PATZ1Q9HBE1 687 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 LPAR2Q9HBW0 351 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 OSGIN1Q9UJX0 560 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 TMPRSS11DO60235 418 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 OSR2Q8N2R0 312 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 LRFN3Q9BTN0 628 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 MS4A18H0YCH9 400 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 IGLV3-27P01718 113 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 AQP6Q13520 282 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 MS4A18Q3C1V0 323 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 DRAM2Q6UX65 266 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 TRBV23-1A0A0A0MS06 115 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 OR2W5A6NFC9 320 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 CYR61O00622 381 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 SCGB1D1O95968 90 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 PPP1CBP62140 327 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 EGR3Q06889 387 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 TIGITQ495A1 244 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 BCDIN3DQ7Z5W3 292 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 TMEM56Q96MV1 263 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 COA4Q9NYJ1 87 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 TAS2R16Q9NYV7 291 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 PCDHGA9Q9Y5G4 932 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 SLC2A10O95528 541 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 IAPPP10997 89 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 Q8IYB0 196 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 OR5R1Q8NH85 324 aa10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 DIMT1Q9UNQ2 313 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 STRAPQ9Y3F4 350 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-213ENST00000399629 ZC3H12DA2A288 527 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 ADAM20O43506 726 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 SPRY1O43609 319 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 SPI1P17947 270 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 ACOT6Q3I5F7 207 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 LACC1Q8IV20 430 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 OR10D3Q8NH80 312 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 CYSLTR2Q9NS75 346 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 SLC25A6P12236 298 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 PTOV1Q86YD1 416 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 IL21Q9HBE4 155 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 PDFQ9HBH1 243 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 FBXO34Q9NWN3 711 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 NAGKQ9UJ70 344 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 SSSCA1O60232 199 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 RFX2P48378 723 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 ADIRFQ15847 76 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 PWWP2BQ6NUJ5 590 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 TMEM99Q8N816 258 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 BTF3L4Q96K17 158 aa10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 RBM14Q96PK6 669 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-213ENST00000399629 DDOQ99489 341 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms