RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SYT6Q5T7P8 510 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 C22orf42Q6IC83 251 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 ANKRD54Q6NXT1 300 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 DHRS13Q6UX07 377 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 ACOT4Q8N9L9 421 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC16A11Q8NCK7 471 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR4F15Q8NGB8 312 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR2A1Q8NGT9 310 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR5K2Q8NHB8 316 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 MAFIPQ8WZ33 124 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 S100PBPQ96BU1 408 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC35G5Q96KT7 338 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 FCRL1Q96LA6 429 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF75AQ96N20 296 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF347Q96SE7 839 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 GFI1Q99684 422 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 TTYH2Q9BSA4 534 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 G6PC3Q9BUM1 346 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 TSSK6Q9BXA6 273 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 YTHDF1Q9BYJ9 559 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 HMG20AQ9NP66 347 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 KIF25Q9UIL4 384 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 CSNK1G3Q9Y6M4 447 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 COL4A3Q01955 1670 aa5.49□□□□□ -1.53
TRAPPC13-202ENST00000399438 F8W036 122 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CCRL2O00421 344 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SPRY2O43597 315 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 GYPBP06028 91 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 H1F0P07305 194 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 MRPL3P09001 348 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 HTR2CP28335 458 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 PEBP1P30086 187 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CSNK1A1P48729 337 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 GABARAPL2P60520 117 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CDC42P60953 191 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 UBE2KP61086 200 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 ADAM8P78325 824 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 EXOSC7Q15024 291 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 NDUFA9Q16795 377 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 TMPRSS11AQ6ZMR5 421 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 C8orf86Q6ZUL3 223 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 HDDC2Q7Z4H3 204 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 MDGA2Q7Z553 956 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 IZUMO1Q8IYV9 350 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 PARP16Q8N5Y8 322 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR5AU1Q8NGC0 362 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 GPR151Q8TDV0 419 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 TRUB1Q8WWH5 349 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 PIK3R3Q92569 461 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SGK494Q96LW2 274 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 RDH12Q96NR8 316 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 EPYCQ99645 322 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CHRNA10Q9GZZ6 450 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SIAEQ9HAT2 523 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SEBOXQ9HB31 216 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 TMEM9Q9P0T7 183 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 UNC13CQ8NB66 2214 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 C2orf16Q68DN1 1984 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 PPIAL4CA0A0B4J2A2 164 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 P2RX6O15547 441 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SOX30O94993 753 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 LDOC1O95751 146 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 LINC00614P0C842 121 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 PPIAL4GP0DN37 164 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SAGP10523 405 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CPMP14384 443 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF43P17038 809 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 RPS19P39019 145 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 GDNFP39905 211 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF91Q05481 1191 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF846Q147U1 533 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF404Q494X3 552 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 NSUN5P2Q63ZY6 315 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR4C11Q6IEV9 310 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SYCE2Q6PIF2 218 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CALHM1Q8IU99 346 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC30A8Q8IWU4 369 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 Q8N402 240 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 NPEPL1Q8NDH3 523 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 WFIKKN2Q8TEU8 576 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 FCAMRQ8WWV6 532 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 LCN9Q8WX39 176 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CREB3L1Q96BA8 519 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 WDR34Q96EX3 536 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 TMED9Q9BVK6 235 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 UCK2Q9BZX2 261 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 POLR2J2Q9GZM3 115 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 MMP28Q9H239 520 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SPIN1Q9Y657 262 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 DENND4AQ7Z401 1863 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 LOC400499M0QZD8 3231 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 LRIT2A6NDA9 550 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 AP4M1O00189 453 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC22A1O15245 554 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 TOX4O94842 621 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 KRT75O95678 551 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 IGHV2-70P01814 119 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CBLP22681 906 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 PDX1P52945 283 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms