RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 GSC2O15499 205 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 TCF21O43680 179 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 GLCEO94923 617 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 HMGN1P05114 100 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 OSMP13725 252 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 CD200P41217 278 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 SLC15A1P46059 708 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 GRB2P62993 217 aaKnown RBP12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 BNIP1Q12981 228 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 HNRNPA0Q13151 305 aaKnown RBP12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 TAF13Q15543 124 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 SNAI3Q3KNW1 292 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 DCAF12L2Q5VW00 463 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 C1orf229Q6ZS94 237 aaPredicted RBP12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 RHOUQ7L0Q8 258 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 DNAJC9Q8WXX5 260 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 ERGIC1Q969X5 290 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 NRBF2Q96F24 287 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 INTS14Q96SY0 518 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 CADM1Q9BY67 442 aaKnown RBP12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 TOR3AQ9H497 397 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 METTL17Q9H7H0 456 aaPredicted RBP12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 MED20Q9H944 212 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 CENPMQ9NSP4 180 aa12.51□□□□□ -0.41
SMIM11A-203ENST00000399299 ARHGAP32A7KAX9 2087 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 A0A0A6YYJ9 748 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 FAM183AA6NL82 134 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 A8MXK9 166 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 PRODHO43272 600 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 XRCC2O43543 280 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 APOC1P02654 83 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 GSTT1P30711 240 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 RASSF2P50749 326 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 PRKXP51817 358 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 PRSS12P56730 875 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 CDK5Q00535 292 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 ZNF92Q03936 586 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 GINS1Q14691 196 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 GLYATL3Q5SZD4 288 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 SHFQ7M4L6 423 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 DPY19L4Q7Z388 723 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 C1QL2Q7Z5L3 287 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 TIGD4Q8IY51 512 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 HS3ST5Q8IZT8 346 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 C1orf87Q8N0U7 546 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 OR6N2Q8NGY6 317 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 ZNF420Q8TAQ5 688 aaPredicted RBP12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 Q8TCH9 128 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
SMIM11A-203ENST00000399299 PRR23D1E9PI22 279 aaPredicted RBP12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 PTBP3O95758 552 aaKnown RBP12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 AVPP01185 164 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 HLA-DPB1P04440 258 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 PRR23D2P0DMB1 279 aaPredicted RBP12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 ANOS1P23352 680 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 POU1F1P28069 291 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 RAD23AP54725 363 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 LCN2P80188 198 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 MAB21L1Q13394 359 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 EIF2B1Q14232 305 aaKnown RBP12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 MOGAT3Q86VF5 341 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 KLBQ86Z14 1044 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 ERI1Q8IV48 349 aaKnown RBP12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 OR2AE1Q8NHA4 323 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 SPSB4Q96A44 273 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 ABHD6Q9BV23 337 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 SP140LQ9H930 580 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 NTN4Q9HB63 628 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 SLC25A19Q9HC21 320 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 MRPL15Q9P015 296 aaKnown RBP12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 LRCH1Q9Y2L9 728 aa12.49□□□□□ -0.41
SMIM11A-203ENST00000399299 LOC105371242A0A075B767 164 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 C5orf63A6NC05 138 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 GGT3PA6NGU5 568 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 CEACAM18A8MTB9 384 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 GMDSO60547 372 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 ATP5HO75947 161 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 CYB5R3P00387 301 aaPredicted RBP12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 PRKACGP22612 351 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 ZFP36P26651 326 aaKnown RBP12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 HSD11B1P28845 292 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 RBMXP38159 391 aaKnown RBP12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 DDOSTP39656 456 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 OPRL1P41146 370 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 CX3CR1P49238 355 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 OR8G1Q15617 311 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 SLC35D3Q5M8T2 416 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 PLBD1Q6P4A8 553 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 ZNF771Q7L3S4 317 aaPredicted RBP12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 SPERTQ8NA61 448 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 PLPP7Q8NBV4 271 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 UTP4Q969X6 686 aaKnown RBP12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 OTULINQ96BN8 352 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 ADAT1Q9BUB4 502 aaKnown RBP12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 C19orf24Q9BVV8 132 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 TEX12Q9BXU0 123 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 OR51V1Q9H2C8 321 aa12.48□□□□□ -0.41
SMIM11A-203ENST00000399299 MMADHCQ9H3L0 296 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms