RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZNF266Q14584 549 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 CREB3L2Q70SY1 520 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OR2Z1Q8NG97 314 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OR13C5Q8NGS8 318 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OCIAD1Q9NX40 245 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 KLK4Q9Y5K2 254 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 CBR3O75828 277 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 HPNP05981 417 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 RHOUQ7L0Q8 258 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 PRSS35Q8N3Z0 413 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OR2A1Q8NGT9 310 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 GPR78Q96P69 363 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OR2A14Q96R47 310 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 FAM173AQ9BQD7 235 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 RNF150Q9ULK6 438 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 BHLHE40O14503 412 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 ATXN7O15265 892 aaPredicted RBP12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 XRCC3O43542 346 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 ATP1B1P05026 303 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 SPI1P17947 270 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 CNR1P21554 472 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 FCN2Q15485 313 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 FAM74A1Q5RGS3 127 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 PAQR6Q6TCH4 344 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 OR52N1Q8NH53 320 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 C20orf24Q9BUV8 137 aa12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 MYO18AQ92614 2054 aaKnown RBP12.87□□□□□ -0.35
PCDHA11-201ENST00000398640 SERTM2A0A1B0GWG4 89 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 TRABD2BA6NFA1 517 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 DBX2Q6ZNG2 339 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 TMEM182Q6ZP80 229 aaPredicted RBP12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 ZNF683Q8IZ20 524 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 FAM109AQ8N4B1 249 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 OR2AE1Q8NHA4 323 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 ALKBH3Q96Q83 286 aaPredicted RBP12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 MRPL22Q9NWU5 206 aaKnown RBP12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 ZNFX1Q9P2E3 1918 aaKnown RBP12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 SDCBPO00560 298 aaPredicted RBP12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 OPRM1P35372 400 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 TGFBR1P36897 503 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 SYT14P1Q58G82 188 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 LHFPL2Q6ZUX7 228 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 GABRG1Q8N1C3 465 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 ING1Q9UK53 422 aaPredicted RBP12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 OR5G3P0C626 314 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 UBE2G1P62253 170 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 SPANXN5Q5MJ07 72 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 CMTM4Q8IZR5 234 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 OR2G3Q8NGZ4 309 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 AGFG2O95081 481 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 HAAOP46952 286 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 RAB5CP51148 216 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 JMJD6Q6NYC1 403 aaPredicted RBP12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 KIR2DS1A0A191URI9 304 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 TRDV1A0A1B0GX56 115 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 SBK2P0C263 348 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 CDAP32320 146 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 KIR2DS4P43632 304 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 KIR2DS1Q14954 304 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 GALNT16Q8N428 558 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 AKR7LQ8NHP1 331 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 TERB2Q8NHR7 220 aa12.86□□□□□ -0.35
PCDHA11-201ENST00000398640 ARPC3O15145 178 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 SLC6A12P48065 614 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 PLAC9Q5JTB6 97 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 PLXDC2Q6UX71 529 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 CDC20BQ86Y33 519 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 ACER3Q9NUN7 267 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 C21orf140B9A014 251 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 SEMG1P04279 462 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 LAP3P28838 519 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 CSN1S1P47710 185 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 RAB35Q15286 201 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 OR2A2Q6IF42 318 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 ACSM5Q6NUN0 579 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 DLEU7Q6UYE1 221 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 OR10AD1Q8NGE0 317 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 OR6K3Q8NGY3 331 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 PLA2G12AQ9BZM1 189 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 FN3KRPQ9HA64 309 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 BARX1Q9HBU1 254 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 RBFOX1Q9NWB1 397 aaKnown RBP12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 A0A0B4J203 849 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 LRP5LA4QPB2 252 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 AIPO00170 330 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 ACOT8O14734 319 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 GPR37O15354 613 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 ADH4P08319 380 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 TAGLN2P37802 199 aaKnown RBP12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 ECI1P42126 302 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 NUBP1P53384 320 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 DSCR4P56555 118 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 DUSP8Q13202 625 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms