RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 TMEM100Q9NV29 134 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 E9PQ18 207 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 LILRA1O75019 489 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 HTR1FP30939 366 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 POLR2IP36954 125 aaKnown RBP12.12□□□□□ -0.47
HDDC2-202ENST00000398153 NAA10P41227 235 aaPredicted RBP12.12□□□□□ -0.47
HDDC2-202ENST00000398153 ROM1Q03395 351 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 KRTAP1-1Q07627 177 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 SNCBQ16143 134 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 ZSCAN26Q16670 478 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 SNAI3Q3KNW1 292 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 CYB5R2Q6BCY4 276 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 Q6ZR03 302 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 KLBQ86Z14 1044 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 CELF2-AS1Q8N7Q2 184 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 MAPK1IP1LQ8NDC0 245 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 OR2Z1Q8NG97 314 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 SPRYD4Q8WW59 207 aaPredicted RBP12.12□□□□□ -0.47
HDDC2-202ENST00000398153 YIPF5Q969M3 257 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 TIMD4Q96H15 378 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 RDH12Q96NR8 316 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 IMPAD1Q9NX62 359 aa12.12□□□□□ -0.47
HDDC2-202ENST00000398153 MRPL15Q9P015 296 aaKnown RBP12.12□□□□□ -0.47
HDDC2-202ENST00000398153 YLPM1P49750 1951 aaKnown RBP12.12□□□□□ -0.47
HDDC2-202ENST00000398153 IGHV4-61A0A0C4DH41 118 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 SNTNA6NMZ2 147 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 CLDN25C9JDP6 229 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 LYNX1G3V0Z9 82 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 MPZL2O60487 215 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 GMDSO60547 372 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 ANXA2P07355 339 aaKnown RBP12.11□□□□□ -0.47
HDDC2-202ENST00000398153 LYNX1P0DP58 116 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 SRP9P49458 86 aaKnown RBP12.11□□□□□ -0.47
HDDC2-202ENST00000398153 SNRPGP62308 76 aaKnown RBP12.11□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF92Q03936 586 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 MEDAGQ5VYS4 303 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 PRSS45Q7RTY3 260 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 KRT77Q7Z794 578 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF679Q8IYX0 411 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 SPERTQ8NA61 448 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
HDDC2-202ENST00000398153 RAB1CQ92928 201 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 AMELYQ99218 206 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 OR10A2Q9H208 303 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 CLN6Q9NWW5 311 aa12.11□□□□□ -0.47
HDDC2-202ENST00000398153 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDDC2-202ENST00000398153 NSD1Q96L73 2696 aaPredicted RBP12.11□□□□□ -0.47
HDDC2-202ENST00000398153 GGT3PA6NGU5 568 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 CD300LBA8K4G0 201 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 PPIHO43447 177 aaKnown RBP12.1□□□□□ -0.47
HDDC2-202ENST00000398153 CDC14BO60729 498 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 BAG2O95816 211 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 SBK2P0C263 348 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 GATA4P43694 442 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF121P58317 390 aaPredicted RBP12.1□□□□□ -0.47
HDDC2-202ENST00000398153 PSMA6P60900 246 aaKnown RBP12.1□□□□□ -0.47
HDDC2-202ENST00000398153 EGR3Q06889 387 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 MZT1Q08AG7 82 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 TIGD6Q17RP2 521 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 GLYATL3Q5SZD4 288 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 SPATC1Q76KD6 591 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 OR5AS1Q8N127 324 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 FTMTQ8N4E7 242 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 PLPP7Q8NBV4 271 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 FAM81AQ8TBF8 368 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 CCL17Q92583 94 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 C1orf159Q96HA4 380 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 ADGRL4Q9HBW9 690 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 TMEM160Q9NX00 188 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 PPP1R3CQ9UQK1 317 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 TANC2Q9HCD6 1990 aa12.1□□□□□ -0.47
HDDC2-202ENST00000398153 NF1P21359 2839 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF670-ZNF695F2Z2N8 137 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 TBX1O43435 398 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 FSTL3O95633 263 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 OR2T7P0C7T2 308 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 IGHV4-31P0DP07 118 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 SLC2A1P11166 492 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 MMP16P51512 607 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 OCLNQ16625 522 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF181Q2M3W8 571 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 LRRN1Q6UXK5 716 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 FAM57BQ71RH2 274 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 PACRGLQ8N7B6 248 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 BHLHE23Q8NDY6 225 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 CSNK2A3Q8NEV1 391 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 OR2T27Q8NH04 317 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 SGK3Q96BR1 496 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 REEP6Q96HR9 211 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 PGAM5Q96HS1 289 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 OR8B4Q96RC9 309 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 SLC29A1Q99808 456 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 LRP12Q9Y561 859 aa12.09□□□□□ -0.47
HDDC2-202ENST00000398153 HIVEP2P31629 2446 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 SETD2Q9BYW2 2564 aaPredicted RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 A0A0U1RQV5 110 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms