RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 RPL34P49207 117 aaKnown RBP10.25□□□□□ -0.77
TTC28-201ENST00000397906 FAAP20Q6NZ36 180 aa10.25□□□□□ -0.77
TTC28-201ENST00000397906 ZNF117Q03924 483 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ADIRFQ15847 76 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 MICBQ29980 383 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ZNF628Q5EBL2 1059 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 RHOUQ7L0Q8 258 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 NLRP8Q86W28 1048 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 NT5CQ8TCD5 201 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 FLVCR1Q9Y5Y0 555 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 HMX2A2RU54 273 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 CA6P23280 308 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 RAP2BP61225 183 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 PDCD1Q15116 288 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 EXOSC3Q9NQT5 275 aaKnown RBP10.24□□□□□ -0.77
TTC28-201ENST00000397906 OR5H15A6NDH6 313 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 OR5H14A6NHG9 310 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 OR5H1A6NKK0 313 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 F6UZH7 168 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 COX7A1P24310 79 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ECI1P42126 302 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 SLC30A7Q8NEW0 376 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 M0QZ24 198 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 P2RX3P56373 397 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 OR10A3P58181 314 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 CREB3L2Q70SY1 520 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 OR2M2Q96R28 347 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ZNF436Q9C0F3 470 aaPredicted RBP10.24□□□□□ -0.77
TTC28-201ENST00000397906 MOB1AQ9H8S9 216 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ASIC5Q9NY37 505 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 MTCH2Q9Y6C9 303 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 PCK2Q16822 640 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 SPRED2Q7Z698 418 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 OR52N1Q8NH53 320 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 TMEM230Q96A57 120 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 TNFRSF12AQ9NP84 129 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 RPS10-NUDT3A0A1W2PQS6 291 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 AQP7P3A6NL99 342 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 CTSVO60911 334 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ELK1P19419 428 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 RPS10P46783 165 aaKnown RBP10.24□□□□□ -0.77
TTC28-201ENST00000397906 SLCO5A1Q9H2Y9 848 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 SLCO1C1Q9NYB5 712 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 HDGFL3Q9Y3E1 203 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 A0A087WUJ7 227 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ALG1L2C9J202 215 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ERHP84090 104 aaKnown RBP10.24□□□□□ -0.77
TTC28-201ENST00000397906 CYHR1Q6ZMK1 362 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 LGI3Q8N145 548 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 AGFG2O95081 481 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 CCL4P13236 92 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 PCBP3P57721 371 aaKnown RBP10.24□□□□□ -0.77
TTC28-201ENST00000397906 NXPH1P58417 271 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 STUMQ69YW2 141 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 OR6K3Q8NGY3 331 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 OR10D3Q8NH80 312 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 PTDSS2Q9BVG9 487 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 SLC31A2O15432 143 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 PI3P19957 117 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ASCL1P50553 236 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 PLAC9Q5JTB6 97 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 ISG20L2Q9H9L3 353 aaKnown RBP10.24□□□□□ -0.77
TTC28-201ENST00000397906 LHX9Q9NQ69 397 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 CMC2Q9NRP2 79 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 PRELID1Q9Y255 219 aa10.24□□□□□ -0.77
TTC28-201ENST00000397906 PRDX4Q13162 271 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 FZD5Q13467 585 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 OR10K2Q6IF99 312 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 HPNP05981 417 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 TNFRSF1AP19438 455 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 SNRPGP62308 76 aaKnown RBP10.23□□□□□ -0.77
TTC28-201ENST00000397906 C15orf54Q8N8G6 183 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 MZB1Q8WU39 189 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 APOBEC4Q8WW27 367 aaKnown RBP10.23□□□□□ -0.77
TTC28-201ENST00000397906 TOX4O94842 621 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 WDR88Q6ZMY6 472 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 SPACA1Q9HBV2 294 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 A4GNTQ9UNA3 340 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 TRBV5-4A0A0C4DH59 114 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 H3BMH7 237 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 IGHV3-13P01766 116 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 IGHV3-7P01780 117 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 TMIGD3P0DMS9 266 aaPredicted RBP10.23□□□□□ -0.77
TTC28-201ENST00000397906 ZNF439Q8NDP4 499 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 SFT2D1Q8WV19 159 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 GALMQ96C23 342 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 LIPAP38571 399 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 R4GMQ9 66 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 CISD3P0C7P0 127 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 FMODQ06828 376 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 OPCMLQ14982 345 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 TMEM108Q6UXF1 575 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 LACC1Q8IV20 430 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 SLC26A1Q9H2B4 701 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 C3orf80F5H4A9 247 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 OR2T2Q6IF00 324 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 ZNF486Q96H40 463 aaPredicted RBP10.23□□□□□ -0.77
TTC28-201ENST00000397906 ATP1B1P05026 303 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 SLC38A9Q8NBW4 561 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 ISL2Q96A47 359 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms