RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SLIT1O75093 1534 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 A0A1W2PR80 420 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 CST7O76096 145 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 MELTFP08582 738 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 RANP62826 216 aaKnown RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 CLN3Q13286 438 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 ZCCHC14Q8WYQ9 949 aaKnown RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 Q96M85 177 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 C11orf54Q9H0W9 315 aaPredicted RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 CLEC1BQ9P126 229 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 LSM2Q9Y333 95 aaKnown RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 MED19A0JLT2 244 aaPredicted RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 TRABD2BA6NFA1 517 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 PRKNO60260 465 aaPredicted RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 RFX2P48378 723 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 HERVK_113P61574 105 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 SNRPGP62308 76 aaKnown RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 MOGAT2Q3SYC2 334 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 COL5A1-AS1Q5SY13 56 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 C1orf140Q5VVS0 124 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 MBOAT2Q6ZWT7 520 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 SLC38A9Q8NBW4 561 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 ABHD3Q8WU67 409 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 GNPNAT1Q96EK6 184 aaPredicted RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 LTB4R2Q9NPC1 389 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 CNOT2Q9NZN8 540 aaKnown RBP11.24□□□□□ -0.61
SMU1-201ENST00000397149 USP22Q9UPT9 525 aa11.24□□□□□ -0.61
SMU1-201ENST00000397149 RPL12P30050 165 aaKnown RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 EIF1P41567 113 aaKnown RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 KIR2DL1P43626 348 aaPredicted RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 KIR2DL2P43627 348 aaPredicted RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 OR3A4PP47883 348 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 FBXO27Q8NI29 283 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 ANKRD60Q9BZ19 345 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 TREM2Q9NZC2 230 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 RCL1Q9Y2P8 373 aaKnown RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 DLC1Q96QB1 1528 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 TRGV10A0A0A0MS01 117 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 SYT5O00445 386 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 APELAP0DMC3 54 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 SPCS3P61009 180 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 HES3Q5TGS1 186 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 PTCRAQ6ISU1 281 aaPredicted RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 KNTC1P50748 2209 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 M0R2Z0 102 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 SNAI1O95863 264 aaPredicted RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 KRASP01116 189 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 H1FNTQ75WM6 255 aaPredicted RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 FADS6Q8N9I5 356 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 OR52I1Q8NGK6 324 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 OR2I1PQ8NGU4 316 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 ASB13Q8WXK3 278 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 CCL17Q92583 94 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 SLC46A1Q96NT5 459 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 ZPBPQ9BS86 351 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 ZNF385DQ9H6B1 395 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 NUMBLQ9Y6R0 609 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 TMEM218A2RU14 115 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 PPP6CO00743 305 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 UBE2L6O14933 153 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 CTNSO60931 367 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 CTSAP10619 480 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 HNRNPA1L2Q32P51 320 aaKnown RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 EIF4E3Q8N5X7 224 aaKnown RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 OR1B1Q8NGR6 318 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 OR6S1Q8NH40 331 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 GRAMD2BQ96HH9 432 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 ADGRG7Q96K78 797 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 COA4Q9NYJ1 87 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 M0R1X1 148 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 RGS7BPQ6MZT1 257 aaPredicted RBP11.23□□□□□ -0.61
SMU1-201ENST00000397149 DEDDO75618 318 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 PIGPP57054 158 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 NKAIN3Q8N8D7 197 aa11.23□□□□□ -0.61
SMU1-201ENST00000397149 SPRY1O43609 319 aaPredicted RBP11.22□□□□□ -0.61
SMU1-201ENST00000397149 JTBO76095 146 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 PLK5Q496M5 336 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 ZNF628Q5EBL2 1059 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 SLC16A12Q6ZSM3 486 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 C7orf43Q8WVR3 580 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 MOGAT1Q96PD6 335 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 TMPRSS11DO60235 418 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 ORM1P02763 201 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 GIPP09681 153 aaPredicted RBP11.22□□□□□ -0.61
SMU1-201ENST00000397149 TBC1D26Q86UD7 250 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 RPS19BP1Q86WX3 136 aaKnown RBP11.22□□□□□ -0.61
SMU1-201ENST00000397149 PIANPQ8IYJ0 282 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
SMU1-201ENST00000397149 C12orf42Q96LP6 360 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 RABAC1Q9UI14 185 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 NDRG4Q9ULP0 352 aaKnown RBP11.22□□□□□ -0.61
SMU1-201ENST00000397149 TNFSF15O95150 251 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 ADRB1P08588 477 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 GALR1P47211 349 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 FUT2Q10981 343 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 PMS2P11Q13670 270 aa11.22□□□□□ -0.61
SMU1-201ENST00000397149 LSRQ86X29 649 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms