RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 RPS6KA6Q9UK32 745 aa12.26□□□□□ -0.45
SEC13-206ENST00000397102 ZNF26P17031 533 aaPredicted RBP12.25□□□□□ -0.45
SEC13-206ENST00000397102 ZBED5Q49AG3 693 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 TEX36Q5VZQ5 186 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 RNF113BQ8IZP6 322 aaKnown RBP12.25□□□□□ -0.45
SEC13-206ENST00000397102 OFCC1Q8IZS5 231 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 OR4C13Q8NGP0 309 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 OR2T6Q8NHC8 308 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 PPP1R35Q8TAP8 253 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 TSPEARQ8WU66 669 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 ITPKCQ96DU7 683 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 NDEL1Q9GZM8 345 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 NUAK2Q9H093 628 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 RANBP3Q9H6Z4 567 aaPredicted RBP12.25□□□□□ -0.45
SEC13-206ENST00000397102 C1orf123Q9NWV4 160 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 AURKCQ9UQB9 309 aa12.25□□□□□ -0.45
SEC13-206ENST00000397102 A0A1W2PRD5 423 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 A0A1W2PRF3 423 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 A0A1W2PRM7 423 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 MEIOCA2RUB1 952 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 H3BUX3 64 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 CDC42EP2O14613 210 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 IMPA2O14732 288 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 LCATP04180 440 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 SDHAP31040 664 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 SAA4P35542 130 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 GPR4P46093 362 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 MAGOHP61326 146 aaKnown RBP12.24□□□□□ -0.45
SEC13-206ENST00000397102 TRAM2Q15035 370 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 MEP1BQ16820 701 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 GPR139Q6DWJ6 353 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 NANOGP8Q6NSW7 305 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 C11orf87Q6NUJ2 197 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 CORO6Q6QEF8 472 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 ZNF826PQ6ZT77 177 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 TMPRSS11FQ6ZWK6 438 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 MRPL21Q7Z2W9 205 aaKnown RBP12.24□□□□□ -0.45
SEC13-206ENST00000397102 ADCK1Q86TW2 530 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 FGFRL1Q8N441 504 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 BEND2Q8NDZ0 799 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 ACOT11Q8WXI4 607 aaPredicted RBP12.24□□□□□ -0.45
SEC13-206ENST00000397102 MAB21L2Q9Y586 359 aa12.24□□□□□ -0.45
SEC13-206ENST00000397102 IGHV3OR15-7A0A075B7D8 119 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 A0A1B0GW55 424 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 hCG_1807616A0A1W2PRN6 198 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 A6NLC8 198 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 CD300LBA8K4G0 201 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 F5H5K5 113 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 LHBP01229 141 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 DUX4L2P0CJ85 424 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 DUX4L3P0CJ86 424 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 DUX4L4P0CJ87 422 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 DUX4L5P0CJ88 424 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 DUX4L6P0CJ89 424 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 DUX4L7P0CJ90 424 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 PRB3Q04118 309 aaPredicted RBP12.23□□□□□ -0.45
SEC13-206ENST00000397102 EMX1Q04741 257 aaPredicted RBP12.23□□□□□ -0.45
SEC13-206ENST00000397102 ACSM1Q08AH1 577 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 POU4F2Q12837 409 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 ECH1Q13011 328 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 KLRD1Q13241 179 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 NSUN5P1Q3KNT7 163 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 LRRC23Q53EV4 343 aaPredicted RBP12.23□□□□□ -0.45
SEC13-206ENST00000397102 CYBRD1Q53TN4 286 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 FOXB2Q5VYV0 432 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 ERICH5Q6P6B1 374 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 DUX4L9Q6RFH8 374 aaPredicted RBP12.23□□□□□ -0.45
SEC13-206ENST00000397102 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.23□□□□□ -0.45
SEC13-206ENST00000397102 NAA40Q86UY6 237 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 Q8N7P7 452 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 TNFRSF14Q92956 283 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 TPD52L3Q96J77 140 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 ATF6BQ99941 703 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 FNDC11Q9BVV2 318 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 MMP28Q9H239 520 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 NRIP3Q9NQ35 241 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 RHCGQ9UBD6 479 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 DUX4Q9UBX2 424 aa12.23□□□□□ -0.45
SEC13-206ENST00000397102 A0A087WUU8 490 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 SOCS2O14508 198 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 NDUFB2O95178 105 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 PPP1R3DO95685 299 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 MPIG6BO95866 241 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 GRPP07492 148 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 VSIG10L2P0DP72 767 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 MUC1P15941 1255 aaPredicted RBP12.22□□□□□ -0.45
SEC13-206ENST00000397102 CRABP1P29762 137 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 YAP1P46937 504 aaKnown RBP12.22□□□□□ -0.45
SEC13-206ENST00000397102 CENPAP49450 140 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 UBE2E1P51965 193 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 DLX1P56177 255 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 MZT1Q08AG7 82 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 TRAP1Q12931 704 aaKnown RBP12.22□□□□□ -0.45
SEC13-206ENST00000397102 CYLC2Q14093 348 aaPredicted RBP12.22□□□□□ -0.45
SEC13-206ENST00000397102 RABL3Q5HYI8 236 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 DNM1P34Q6PK57 102 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 ZNF730Q6ZMV8 503 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 CFAP77Q6ZQR2 320 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 PTCHD4Q6ZW05 846 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms