RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 MEP1BQ16820 701 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 ABLIM2Q6H8Q1 611 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 KCTD18Q6PI47 426 aaPredicted RBP15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 CLEC9AQ6UXN8 241 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 OR8H2Q8N162 312 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 RNF128Q8TEB7 428 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 PIGTQ969N2 578 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 PIK3IP1Q96FE7 263 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 ABHD6Q9BV23 337 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 ELOVL3Q9HB03 270 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 CYSLTR2Q9NS75 346 aa15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 MCTS1Q9ULC4 181 aaKnown RBP15.26■□□□□ 0.03
TNFSF13-205ENST00000396545 C16orf97H3BN30 126 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 SMPD2O60906 423 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 TMCC2O75069 709 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 TMEM127O75204 238 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 AQP8O94778 261 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 MPZL1O95297 269 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 HEXAP06865 529 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 AZGP1P25311 298 aaKnown RBP15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 CLDN17P56750 224 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 HIST3H3Q16695 136 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 Q499Y3 187 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 LRRN1Q6UXK5 716 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 LRRC28Q86X40 367 aaPredicted RBP15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 OR52N5Q8NH56 324 aa15.25■□□□□ 0.03
TNFSF13-205ENST00000396545 A0A1W2PPK0 400 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 GPR171O14626 319 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 RAMP1O60894 148 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ZNF254O75437 659 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 HLA-DQB1P01920 261 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 CSF3P09919 207 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ELK1P19419 428 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 SRMP19623 302 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 MAPK3P27361 379 aaPredicted RBP15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 LOXP28300 417 aaPredicted RBP15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 KIR3DL2P43630 455 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 EIF2B1Q14232 305 aaKnown RBP15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 WDR38Q5JTN6 314 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 OTPQ5XKR4 325 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 C22orf34Q6ZV56 151 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 FCRLAQ7L513 359 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 FAM214BQ7L5A3 538 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 GLB1L2Q8IW92 636 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 PRSS35Q8N3Z0 413 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ZNF610Q8N9Z0 462 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 HS3ST6Q96QI5 342 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 EMC6Q9BV81 110 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 COMMD4Q9H0A8 199 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 UBTD1Q9HAC8 227 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 B3GAT2Q9NPZ5 323 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ABRACLQ9P1F3 81 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 CSPG4Q6UVK1 2322 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 RAI1Q7Z5J4 1906 aaPredicted RBP15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 IGKV3D-15A0A087WSY6 115 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 TRBV5-7A0A0A0MS05 114 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 A0A1W2PQ09 198 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ACOD1A6NK06 481 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ZNF716A6NP11 495 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 PDCD5O14737 125 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 FCGR2AP12318 317 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ZNF823P16415 610 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ATF1P18846 271 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 NPR2P20594 1047 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ZNF133P52736 654 aaPredicted RBP15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 PRSS57Q6UWY2 283 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 GDPD3Q7L5L3 318 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 ST7LQ8TDW4 575 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 CCL19Q99731 98 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 EMC3Q9P0I2 261 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 PROCRQ9UNN8 238 aa15.24■□□□□ 0.03
TNFSF13-205ENST00000396545 SRSF10O75494 262 aaKnown RBP15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 WNT11O96014 354 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 SLC2A2P11168 524 aaPredicted RBP15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 SPNP16150 400 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 CSNK1A1P48729 337 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 RIDAP52758 137 aaKnown RBP15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 CAMK2DQ13557 499 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 PYDC2Q56P42 97 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 SLC25A47Q6Q0C1 308 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 DEGS2Q6QHC5 323 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 C20orf204Q6ZNR8 217 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 KRT77Q7Z794 578 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 ZNF554Q86TJ5 538 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 TRMT10AQ8TBZ6 339 aaKnown RBP15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 THRSPQ92748 146 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 TMEM54Q969K7 222 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 TMEM45BQ96B21 275 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 OR2M2Q96R28 347 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 GFI1Q99684 422 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 ETAA1Q9NY74 926 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 GLTPQ9NZD2 209 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 LRP12Q9Y561 859 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 FLVCR1Q9Y5Y0 555 aa15.23■□□□□ 0.03
TNFSF13-205ENST00000396545 DSCAMO60469 2012 aa15.22■□□□□ 0.03
TNFSF13-205ENST00000396545 IGHV3-15A0A0B4J1V0 119 aa15.22■□□□□ 0.03
TNFSF13-205ENST00000396545 FAM25AB3EWG3 89 aa15.22■□□□□ 0.03
TNFSF13-205ENST00000396545 FAM25CB3EWG5 89 aa15.22■□□□□ 0.03
TNFSF13-205ENST00000396545 FAM25GB3EWG6 89 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms