RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 OR52N4Q8NGI2 321 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 ZNF385AQ96PM9 386 aaKnown RBP12.34□□□□□ -0.43
SNCA-204ENST00000394989 ARRDC1-AS1Q9H2J1 176 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 CNTD2Q9H8S5 307 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 TCFL5Q9UL49 500 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 LOXL2Q9Y4K0 774 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 MEGF11A6BM72 1044 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 SYT7O43581 403 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 CD63P08962 238 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 SLC2A1P11166 492 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 MPLP40238 635 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 MECP2P51608 486 aaKnown RBP12.34□□□□□ -0.43
SNCA-204ENST00000394989 PSMA6P60900 246 aaKnown RBP12.34□□□□□ -0.43
SNCA-204ENST00000394989 KCNMB1Q16558 191 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 DCAF12Q5T6F0 453 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 B3GNTL1Q67FW5 361 aaPredicted RBP12.34□□□□□ -0.43
SNCA-204ENST00000394989 OR51E1Q8TCB6 317 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 GPX8Q8TED1 209 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 POLR1DQ9Y2S0 133 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 SESN1Q9Y6P5 492 aa12.34□□□□□ -0.43
SNCA-204ENST00000394989 ASPMQ8IZT6 3477 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 WIPF3A6NGB9 483 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 G3V3Q6 166 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 LINC01387J3KSC0 135 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 MTRF1O75570 445 aaKnown RBP12.33□□□□□ -0.44
SNCA-204ENST00000394989 PRKXP51817 358 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 GLDNQ6ZMI3 551 aaPredicted RBP12.33□□□□□ -0.44
SNCA-204ENST00000394989 RNF144BQ7Z419 303 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 NKAIN3Q8N8D7 197 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 CLEC1AQ8NC01 280 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 OR2AJ1Q8NGZ0 328 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 ZMAT3Q9HA38 289 aaKnown RBP12.33□□□□□ -0.44
SNCA-204ENST00000394989 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
SNCA-204ENST00000394989 MGAT4CQ9UBM8 478 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 ZNF69Q9UC07 566 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 NPTNQ9Y639 398 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 KIAA1549Q9HCM3 1950 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 NCOA6Q14686 2063 aaPredicted RBP12.33□□□□□ -0.44
SNCA-204ENST00000394989 PRAF2O60831 178 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 ZNF17P17021 662 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 OTX2P32243 289 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 PRSS3P35030 304 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 ZNF529Q6P280 563 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 RHOUQ7L0Q8 258 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 PAQR4Q8N4S7 273 aaPredicted RBP12.33□□□□□ -0.44
SNCA-204ENST00000394989 SEH1LQ96EE3 360 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 EMC3Q9P0I2 261 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 DKKL1Q9UK85 242 aa12.33□□□□□ -0.44
SNCA-204ENST00000394989 LNP1A1A4G5 178 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 E9PLN8 166 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 PYCARD-AS1I3L0S3 204 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 CD3DP04234 171 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 CSF1P09603 554 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 TCN2P20062 427 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 HSD11B1P28845 292 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 ZNF627Q7L945 461 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 OR8B12Q8NGG6 310 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 DVL3Q92997 716 aaPredicted RBP12.32□□□□□ -0.44
SNCA-204ENST00000394989 MARVELD3Q96A59 401 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 PADI1Q9ULC6 663 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 CNTRLQ7Z7A1 2325 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 FXYD6-FXYD2A0A087WZ82 144 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 A0A0J9YW62 118 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 SPDEFO95238 335 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 CXCL2P19875 107 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 BDKRB2P30411 391 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 GNALP38405 381 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 ZNF121P58317 390 aaPredicted RBP12.32□□□□□ -0.44
SNCA-204ENST00000394989 METTL11BQ5VVY1 283 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 CT55Q8WUE5 264 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 SRXN1Q9BYN0 137 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 ZNF436Q9C0F3 470 aaPredicted RBP12.32□□□□□ -0.44
SNCA-204ENST00000394989 FXYD6Q9H0Q3 95 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 CA10Q9NS85 328 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 NCOR1O75376 2440 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 C5orf63A6NC05 138 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 TNFSF11O14788 317 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 CBR3O75828 277 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 GTF2F2P13984 249 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 B3GALT5-AS1P59052 145 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 UNC119Q13432 240 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 CCDC157Q569K6 752 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 TMEM88Q6PEY1 159 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 LINC00518Q8N0U6 118 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 OR1M1Q8NGA1 313 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 TMEM41AQ96HV5 264 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 ARL6Q9H0F7 186 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 PCDHB16Q9NRJ7 776 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 TAS2R8Q9NYW2 309 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 ATPIF1Q9UII2 106 aa12.32□□□□□ -0.44
SNCA-204ENST00000394989 FAM74A7A6NL05 159 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 VSIG10L2P0DP72 767 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 ABOP16442 354 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 AKR1C2P52895 323 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 QRFPP83859 136 aa12.31□□□□□ -0.44
SNCA-204ENST00000394989 AKR1C1Q04828 323 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms