RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SIRPAP78324 504 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SLC9A3R2Q15599 337 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ABCA11PQ4W5N1 156 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 TEX30Q5JUR7 227 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 DHRS7BQ6IAN0 325 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 SLC25A45Q8N413 288 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 TMEM99Q8N816 258 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 CLEC1AQ8NC01 280 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 FAM213BQ8TBF2 198 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SLC39A7Q92504 469 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 HAS2Q92819 552 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ANKRD9Q96BM1 317 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 ZNF681Q96N22 645 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 CCNL2Q96S94 520 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 PDCD1LG2Q9BQ51 273 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ZPBPQ9BS86 351 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 RAB33BQ9H082 229 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 KCND3Q9UK17 655 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ING1Q9UK53 422 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 NTNG1Q9Y2I2 539 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 R4GN57 208 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 DBX1A6NMT0 343 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 GPRIN2O60269 458 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 IL33O95760 270 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 MSX1P28360 303 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 HSD11B1P28845 292 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 GPX4P36969 197 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 SLC26A5P58743 744 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 NHLH2Q02577 135 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 FOXO1Q12778 655 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 MEF2DQ14814 521 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SURF2Q15527 256 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 ZNF658BQ4V348 819 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 RPS19BP1Q86WX3 136 aaKnown RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 UEVLDQ8IX04 471 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SLC43A2Q8N370 569 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 GALNT16Q8N428 558 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SDR9C7Q8NEX9 313 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 GPR32P1Q8NGA4 272 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 OR1N1Q8NGS0 311 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SECTM1Q8WVN6 248 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ASB13Q8WXK3 278 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 THRSPQ92748 146 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 OR5B2Q96R09 309 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ARHGDIGQ99819 225 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 HCAR1Q9BXC0 346 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 LAT2Q9GZY6 243 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 METTL9Q9H1A3 318 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 LHX9Q9NQ69 397 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ZNF230Q9UIE0 474 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 TMED7-TICAM2A0A0A6YYA0 188 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 A6NIZ1 184 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 PDGFBP01127 241 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 ZNF43P17038 809 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SLC2A5P22732 501 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SFTPDP35247 375 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 GSK3AP49840 483 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 P2RX1P51575 399 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 TAS2R31P59538 309 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 RAP1BP61224 184 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 DMWDQ09019 674 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ELFN2Q5R3F8 820 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 NSUN5P2Q63ZY6 315 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ZNF385CQ66K41 422 aaPredicted RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 RHBDD2Q6NTF9 364 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 RPL22L1Q6P5R6 122 aaKnown RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 OVCH1Q7RTY7 1134 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 C1orf87Q8N0U7 546 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 OR4N2Q8NGD1 307 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 C8orf44Q96CB5 159 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 NUDT9Q9BW91 350 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 VN1R1Q9GZP7 353 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 CHST8Q9H2A9 424 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SMOC1Q9H4F8 434 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 HINT3Q9NQE9 182 aaKnown RBP5.13□□□□□ -1.59
RFFL-202ENST00000394597 PILRBQ9UKJ0 227 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 A4GNTQ9UNA3 340 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 GAB2Q9UQC2 676 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 TMED7Q9Y3B3 224 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 DOPEY2Q9Y3R5 2298 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 TRAV36DV7A0A075B6V5 113 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 ZC3H12DA2A288 527 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 PATE3B3GLJ2 98 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SULT2B1O00204 365 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 FOXS1O43638 330 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 PRKNO60260 465 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 ZNF354AO60765 605 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 LRP3O75074 770 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 KNG1P01042 644 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 CD3DP04234 171 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 CT62P0C5K7 136 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SLC2A1P11166 492 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 CRABP1P29762 137 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 DAP3P51398 398 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 HMGA2P52926 109 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 FOXK2Q01167 660 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 MPPED2Q15777 294 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 TMEM41BQ5BJD5 291 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 EXOSC6Q5RKV6 272 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 SLC35F2Q8IXU6 374 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms