RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CDH26Q8IXH8 852 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 LOC390937A0A1W2PQ73 354 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 OR2J2O76002 312 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 CD74P04233 296 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 BDKRB2P30411 391 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 PCK2Q16822 640 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 CPEB2Q7Z5Q1 589 aaKnown RBP11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 BHLHE23Q8NDY6 225 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 EDEM2Q9BV94 578 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 A0A1B0GTI1 187 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 VSTM2BA6NLU5 285 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 TTLL8A6PVC2 850 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 SOCS1O15524 211 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 ISG15P05161 165 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 CCL4P13236 92 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 ZP3P21754 424 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 VAMP1P23763 118 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 OR3A4PP47883 348 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 ANGPTL5Q86XS5 388 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 OR1M1Q8NGA1 313 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 OR5D18Q8NGL1 313 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 OR5M9Q8NGP3 310 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 OR5M8Q8NGP6 311 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 MFSD8Q8NHS3 518 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 NPRL2Q8WTW4 380 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 PPP1R1CQ8WVI7 109 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 MAFIPQ8WZ33 124 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 ZBTB8AQ96BR9 441 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 FAM71F1Q96KD3 344 aaPredicted RBP11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 PDCD10Q9BUL8 212 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 CYB5R1Q9UHQ9 305 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 RNF222A6NCQ9 220 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 A8MXK9 166 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 EEF1E1-BLOC1S5C9J1V9 151 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 D6RAR5 112 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 CDK2AP1O14519 115 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 PTGDSP41222 190 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 RNASE10Q5GAN6 216 aaKnown RBP11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 PRAMEF20Q5VT98 475 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 ELP2Q6IA86 826 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 SPERTQ8NA61 448 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 BVESQ8NE79 360 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 TMEM234Q8WY98 164 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 ST8SIA2Q92186 375 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 ASH2LQ9UBL3 628 aa11.94□□□□□ -0.5
GTF2F1-201ENST00000394456 RAD51DO75771 328 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 TPPPO94811 219 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 RPA2P15927 270 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 ZBTB25P24278 435 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 DAP3P51398 398 aaKnown RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 PRSS12P56730 875 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 C17orf67Q0P5P2 114 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 TMEM244Q5VVB8 128 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 TCEAL6Q6IPX3 200 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 ZNF704Q6ZNC4 412 aaPredicted RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 OR10H5Q8NGA6 315 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 TCEAL3Q969E4 200 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 MRPS24Q96EL2 167 aaKnown RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 VRK1Q99986 396 aaPredicted RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 ALX4Q9H161 411 aaPredicted RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 RPH3AQ9Y2J0 694 aaPredicted RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 A6NIZ1 184 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 TRIM77I1YAP6 450 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 ERCC1P07992 297 aaPredicted RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 FGF2P09038 288 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 C4BPBP20851 252 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 MMP16P51512 607 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 RAP1BP61224 184 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 RAP1AP62834 184 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 ZP4Q12836 540 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 BAMBIQ13145 260 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 PLAC9Q5JTB6 97 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 JMJD6Q6NYC1 403 aaPredicted RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 ZNF101Q8IZC7 436 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 OR6K3Q8NGY3 331 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 NUBPLQ8TB37 319 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 MARCH1Q8TCQ1 289 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 LIN37Q96GY3 246 aaPredicted RBP11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 OR5B2Q96R09 309 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 PPP4R1LQ9P1A2 415 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 POLR1DQ9Y2S0 133 aa11.93□□□□□ -0.5
GTF2F1-201ENST00000394456 G3V3Y1 287 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 SULT1C2O00338 296 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 STK17BO94768 372 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 HPP00738 406 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 ZNF17P17021 662 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 NAGAP17050 411 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 MPPED2Q15777 294 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 PLPPR5Q32ZL2 321 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 UNQ6126/PRO20091Q6UXV3 157 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 ABHD12BQ7Z5M8 362 aaPredicted RBP11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 OR5AS1Q8N127 324 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 OR8B12Q8NGG6 310 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 CCDC107Q8WV48 283 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 SLC25A21Q9BQT8 299 aaPredicted RBP11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 MRPL13Q9BYD1 178 aaKnown RBP11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 SHARPINQ9H0F6 387 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 SCPEP1Q9HB40 452 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 KLHL13Q9P2N7 655 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms