RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ZNF322Q6U7Q0 402 aaPredicted RBP12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 USP51Q70EK9 711 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 FAM57BQ71RH2 274 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 ENTHD1Q8IYW4 607 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF679Q8IYX0 411 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR5AS1Q8N127 324 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF786Q8N393 782 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF540Q8NDQ6 660 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR8G5Q8NG78 346 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR2T27Q8NH04 317 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR2AE1Q8NHA4 323 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 RDH5Q92781 318 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 PGAM5Q96HS1 289 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 C18orf12Q96KH6 178 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 COX4I2Q96KJ9 171 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 EGLN1Q9GZT9 426 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR10A2Q9H208 303 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 SAP30LQ9HAJ7 183 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 MSL2Q9HCI7 577 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 DLL4Q9NR61 685 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
IGHV3-53-201ENST00000390627 F8P00451 2351 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF469Q96JG9 3925 aaPredicted RBP12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 RNF223E7ERA6 249 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 PSMD9O00233 223 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 NCR1O76036 304 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 CD55P08174 381 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 GABRB1P18505 474 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 DCTDP32321 178 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 CDK5R2Q13319 367 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF829Q3KNS6 432 aaPredicted RBP12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 PRSS45Q7RTY3 260 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 DHRSXQ8N5I4 330 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 BHLHE23Q8NDY6 225 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR10H4Q8NGA5 316 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR13G1Q8NGZ3 307 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 RHOXF1Q8NHV9 184 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 SPRYD4Q8WW59 207 aaPredicted RBP12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 CYGBQ8WWM9 190 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 SPSB4Q96A44 273 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 ELMOD3Q96FG2 381 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 REPIN1Q9BWE0 567 aaKnown RBP12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 REG4Q9BYZ8 158 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 TTTY10Q9BZA0 68 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 RGCCQ9H4X1 137 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 CHODLQ9H9P2 273 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 BRD7Q9NPI1 651 aa12.8□□□□□ -0.36
IGHV3-53-201ENST00000390627 ITPR3Q14573 2671 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 GGT3PA6NGU5 568 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 ACOD1A6NK06 481 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 APOL3O95236 402 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 INHBBP09529 407 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 ACHEP22303 614 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 ACTC1P68032 377 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 ACTA1P68133 377 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 TNFAIP6P98066 277 aaPredicted RBP12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 IL5RAQ01344 420 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 Q6ZR03 302 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF771Q7L3S4 317 aaPredicted RBP12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 CIARTQ8N365 385 aaPredicted RBP12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 RFLNBQ8N5W9 214 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 SETD9Q8NE22 299 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 OR2Z1Q8NG97 314 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 RNFT2Q96EX2 444 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 REEP6Q96HR9 211 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 TBX5Q99593 518 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 SLC30A2Q9BRI3 323 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 TMEM100Q9NV29 134 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 NKX1-2Q9UD57 310 aaPredicted RBP12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 NOP16Q9Y3C1 178 aaKnown RBP12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 PCDHGB1Q9Y5G3 927 aa12.79□□□□□ -0.36
IGHV3-53-201ENST00000390627 CHD3Q12873 2000 aaKnown RBP12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 IGHV1-69-2A0A0G2JMI3 117 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 TMEM269A0A1B0GVZ9 245 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 A0A1W2PQL4 384 aaPredicted RBP12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 C5orf63A6NC05 138 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 CD300LBA8K4G0 201 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 PRR32B1ATL7 298 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 SMAD7O15105 426 aaKnown RBP12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 KRT8P05787 483 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 ANOS1P23352 680 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 GIFP27352 417 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 DDOSTP39656 456 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 NR4A2P43354 598 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 PRSS12P56730 875 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF91Q05481 1191 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 IL18R1Q13478 541 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF691Q5VV52 312 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 LURAP1LQ8IV03 231 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 ADI1Q9BV57 179 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 SLC22A4Q9H015 551 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 MOB1AQ9H8S9 216 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 IL19Q9UHD0 177 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 ZNF391Q9UJN7 358 aa12.78□□□□□ -0.36
IGHV3-53-201ENST00000390627 MED13LQ71F56 2210 aa12.77□□□□□ -0.36
IGHV3-53-201ENST00000390627 VWC2LB2RUY7 222 aa12.77□□□□□ -0.37
IGHV3-53-201ENST00000390627 LYNX1G3V0Z9 82 aa12.77□□□□□ -0.37
IGHV3-53-201ENST00000390627 H0YAE9 185 aa12.77□□□□□ -0.37
IGHV3-53-201ENST00000390627 LYNX1P0DP58 116 aa12.77□□□□□ -0.37
IGHV3-53-201ENST00000390627 DBTP11182 482 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms