RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 OC90Q02509 493 aaPredicted RBP13.24□□□□□ -0.29
SCFD2-201ENST00000388940 TAF13Q15543 124 aa13.24□□□□□ -0.29
SCFD2-201ENST00000388940 PXDC1Q5TGL8 231 aa13.24□□□□□ -0.29
SCFD2-201ENST00000388940 OR13C9Q8NGT0 318 aa13.24□□□□□ -0.29
SCFD2-201ENST00000388940 OR10Z1Q8NGY1 313 aa13.24□□□□□ -0.29
SCFD2-201ENST00000388940 IFI44Q8TCB0 444 aa13.24□□□□□ -0.29
SCFD2-201ENST00000388940 NTNG2Q96CW9 530 aa13.24□□□□□ -0.29
SCFD2-201ENST00000388940 IMMP1LQ96LU5 166 aa13.24□□□□□ -0.29
SCFD2-201ENST00000388940 GPN3Q9UHW5 284 aaPredicted RBP13.24□□□□□ -0.29
SCFD2-201ENST00000388940 IGHV1-45A0A0A0MS14 117 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 RFPL4AA6NLU0 287 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 RFPL4AL1F8VTS6 287 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 RP2O75695 350 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 CHRM2P08172 466 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 RPA2P15927 270 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 ZNF93P35789 620 aaPredicted RBP13.23□□□□□ -0.29
SCFD2-201ENST00000388940 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
SCFD2-201ENST00000388940 EXT1Q16394 746 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 AANATQ16613 207 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 RNASE10Q5GAN6 216 aaKnown RBP13.23□□□□□ -0.29
SCFD2-201ENST00000388940 LY6G6FQ5SQ64 297 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 LPCAT3Q6P1A2 487 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 C11orf88Q6PI97 169 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 OPN5Q6U736 354 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 TRAPPC6BQ86SZ2 158 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 WDR5BQ86VZ2 330 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 ANGPTL5Q86XS5 388 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 UBALD2Q8IYN6 164 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 LINC00469Q8N7U9 141 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 ZDHHC22Q8N966 263 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 OR8B12Q8NGG6 310 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 OR10R2Q8NGX6 335 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 NKD1Q969G9 470 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 ZNF700Q9H0M5 742 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 MED9Q9NWA0 146 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 RAMP1O60894 148 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 CD8AP01732 235 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 TBPP20226 339 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 SFTPDP35247 375 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 ZNF121P58317 390 aaPredicted RBP13.23□□□□□ -0.29
SCFD2-201ENST00000388940 LSM6P62312 80 aaKnown RBP13.23□□□□□ -0.29
SCFD2-201ENST00000388940 H3F3AP84243 136 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 CARD17Q5XLA6 110 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 SLC25A42Q86VD7 318 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 OR5AS1Q8N127 324 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 M1APQ8TC57 530 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 ANGPTL4Q9BY76 406 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 GAREM1Q9H706 876 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 FSCN3Q9NQT6 498 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 ASH2LQ9UBL3 628 aa13.23□□□□□ -0.29
SCFD2-201ENST00000388940 FARSAQ9Y285 508 aaKnown RBP13.23□□□□□ -0.29
SCFD2-201ENST00000388940 USP34Q70CQ2 3546 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 FXYD6-FXYD2A0A087WZ82 144 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 FAM25EA8MYX2 175 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 KLK3P07288 261 aaPredicted RBP13.22□□□□□ -0.29
SCFD2-201ENST00000388940 HLA-GP17693 338 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 PRKXP51817 358 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 ZNF133P52736 654 aaPredicted RBP13.22□□□□□ -0.29
SCFD2-201ENST00000388940 DHRS2Q13268 280 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 EIF3IQ13347 325 aaKnown RBP13.22□□□□□ -0.29
SCFD2-201ENST00000388940 TRA2AQ13595 282 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCFD2-201ENST00000388940 STK11Q15831 433 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 DOK3Q7L591 496 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 TMED4Q7Z7H5 227 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 CHST4Q8NCG5 386 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 OR4S1Q8NGB4 309 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 FXYD6Q9H0Q3 95 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 PLEKHA6Q9Y2H5 1048 aa13.22□□□□□ -0.29
SCFD2-201ENST00000388940 RER1O15258 196 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 UMODP07911 640 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
SCFD2-201ENST00000388940 CXADRP78310 365 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 FGL1Q08830 312 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 HYAL4Q2M3T9 481 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 SCGB2B2Q4G0G5 96 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 PRAMEF20Q5VT98 475 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 AWAT2Q6E213 333 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 FAHD2BQ6P2I3 314 aaPredicted RBP13.21□□□□□ -0.29
SCFD2-201ENST00000388940 TMEM65Q6PI78 240 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 ABHD12BQ7Z5M8 362 aaPredicted RBP13.21□□□□□ -0.29
SCFD2-201ENST00000388940 STEAP2Q8NFT2 490 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 OR5M8Q8NGP6 311 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 LRRC20Q8TCA0 184 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 SCARB1Q8WTV0 552 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 CMBLQ96DG6 245 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 FAHD2AQ96GK7 314 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 ARL6Q9H0F7 186 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 GPR84Q9NQS5 396 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 VSIG4Q9Y279 399 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 I3L521 148 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 NTN3O00634 580 aaPredicted RBP13.21□□□□□ -0.29
SCFD2-201ENST00000388940 NDUFA2O43678 99 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 IL2RAP01589 272 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 COX6A1P12074 109 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 ABOP16442 354 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 ZNF17P17021 662 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 CBX5P45973 191 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 CX3CR1P49238 355 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 FAM189A2Q15884 450 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 C10orf128Q5T292 105 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms