RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 A0A0C4DFX4 3053 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 VSTM2BA6NLU5 285 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 PPP5D1E7EU14 171 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 SOCS6O14544 535 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 OR3A2P47893 321 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 RAB28P51157 221 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 CDC42EP1Q00587 391 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 COL10A1Q03692 680 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ACVR1Q04771 509 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ACSM2AQ08AH3 577 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 VAMP3Q15836 100 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 TPTE2P1Q5T6R2 138 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ACSM2BQ68CK6 577 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 UNQ5815/PRO19632Q6UWF5 114 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 HMGN2P46Q86SG4 172 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 SERPINA9Q86WD7 417 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 RBM45Q8IUH3 476 aaKnown RBP8.41□□□□□ -1.06
PTPRA-204ENST00000380393 TTC9BQ8N6N2 239 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 OR6T1Q8NGN1 323 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 KCNE4Q8WWG9 221 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 SLC17A5Q9NRA2 495 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 SLC7A7Q9UM01 511 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 OSGIN2Q9Y236 505 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 C1orf226A1L170 272 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 TNFSF13O75888 250 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 SLCO2B1O94956 709 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ONECUT2O95948 504 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 OR2T7P0C7T2 308 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 SELPP16109 830 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 CPTPQ5TA50 214 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 TOMM20LQ6UXN7 152 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 Q6ZVU0 165 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 SLC25A26Q70HW3 274 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ADCK2Q7Z695 626 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 H1FOOQ8IZA3 346 aaPredicted RBP8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ST6GALNAC3Q8NDV1 305 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 OR9K2Q8NGE7 335 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ERGIC1Q969X5 290 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 GPA33Q99795 319 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 SCRT1Q9BWW7 348 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 ZDHHC6Q9H6R6 413 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 TM7SF3Q9NS93 570 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 CRLS1Q9UJA2 301 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 PRSS21Q9Y6M0 314 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 COX11Q9Y6N1 276 aa8.41□□□□□ -1.06
PTPRA-204ENST00000380393 WDR1O75083 606 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 RAB40ALP0C0E4 278 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 KCNE1P15382 129 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 PTGER3P43115 390 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 PPP2CBP62714 309 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 RANP62826 216 aaKnown RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 PPP2CAP67775 309 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 ARF5P84085 180 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 PSG6Q00889 435 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 GUCA2AQ02747 115 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 ZNF763Q0D2J5 394 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 PIN1Q13526 163 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 CCSMST1Q4G0I0 132 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 CLLU1OSQ5K130 101 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 STEAP1BQ6NZ63 245 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 LEG1Q6P5S2 330 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 TMEM99Q8N816 258 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 OR4D5Q8NGN0 318 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 GPR119Q8TDV5 335 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 RAB40AQ8WXH6 277 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 SEH1LQ96EE3 360 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 TMEM169Q96HH4 297 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 SLC25A18Q9H1K4 315 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 CXorf36Q9H7Y0 433 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 FRMPD3Q5JV73 1810 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 DGKAP23743 735 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 CLDN18P56856 261 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 SAMD13Q5VXD3 122 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 TIFAQ96CG3 184 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 HAVCR1Q96D42 359 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 VWCEQ96DN2 955 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 SPACA9Q96E40 222 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 LOXL4Q96JB6 756 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 DPEP2Q9H4A9 486 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 CUTCQ9NTM9 273 aa8.4□□□□□ -1.06
PTPRA-204ENST00000380393 FOXD3Q9UJU5 478 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 YBX2Q9Y2T7 364 aaKnown RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 PCYT1BQ9Y5K3 369 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-204ENST00000380393 A0A0A6YYH2 397 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 A6NJ64 397 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 H0YL77 283 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 OR6A2O95222 327 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 CST4P01036 141 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 KLK2P20151 261 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 HTR1FP30939 366 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 PYCR1P32322 319 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 GLIPR1P48060 266 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 CAMLGP49069 296 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 SMIM11AP58511 58 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 CHIT1Q13231 466 aa8.4□□□□□ -1.07
PTPRA-204ENST00000380393 PWWP2BQ6NUJ5 590 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms