RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 SIAEQ9HAT2 523 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 FAM181BA6NEQ2 426 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 LRP3O75074 770 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 CHRM2P08172 466 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 BMI1P35226 326 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 ZNF534Q76KX8 674 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 NRARPQ7Z6K4 114 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 TMEM202A6NGA9 273 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 CD27P26842 260 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 DAPP51397 102 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 MORN1Q5T089 497 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 TM4SF18Q96CE8 201 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 TMEM147Q9BVK8 224 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 A0A1B0GVG6 124 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 ZNF354AO60765 605 aaPredicted RBP11.29□□□□□ -0.6
CHD3-203ENST00000380358 AGFG2O95081 481 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 PAPLNO95428 1278 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 MBP02144 154 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 PCBP4P57723 403 aaKnown RBP11.29□□□□□ -0.6
CHD3-203ENST00000380358 MRPS10P82664 201 aaKnown RBP11.29□□□□□ -0.6
CHD3-203ENST00000380358 MLLT11Q13015 90 aaPredicted RBP11.29□□□□□ -0.6
CHD3-203ENST00000380358 GUCA2BQ16661 112 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 LHX4Q969G2 390 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 UBE2FQ969M7 185 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 NIT2Q9NQR4 276 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 POM121BA6NF01 834 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 SERPINE3A8MV23 424 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 GFYI3L273 518 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 PHOX2AO14813 284 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 DFFBO76075 338 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 FAM3AP98173 230 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 PHOSPHO2Q8TCD6 241 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 ZNF384Q8TF68 577 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 CEPT1Q9Y6K0 416 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 SNRPNP63162 240 aaKnown RBP11.29□□□□□ -0.6
CHD3-203ENST00000380358 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHD3-203ENST00000380358 OR6K3Q8NGY3 331 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 TTC9Q92623 222 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 SLC25A32Q9H2D1 315 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 LHX3Q9UBR4 397 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 LIPGQ9Y5X9 500 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 BSGP35613 385 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 WIPI1Q5MNZ9 446 aaPredicted RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 C17orf99Q6UX52 265 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 DPY19L2P2Q6ZN68 376 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 TIPARPQ7Z3E1 657 aaKnown RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 BCORP1Q8N888 145 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 IL22RA2Q969J5 263 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 GALMQ96C23 342 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 NIPSNAP1Q9BPW8 284 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 CLMPQ9H6B4 373 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 MOKQ9UQ07 419 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 SPAG17Q6Q759 2223 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 CLEC18AA5D8T8 446 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 PLRG1O43660 514 aaKnown RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 SCGB1A1P11684 91 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 ZBTB25P24278 435 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 RPL27P61353 136 aaKnown RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 DUSP5Q16690 384 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 ZNF573Q86YE8 665 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 CLEC18CQ8NCF0 446 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 NOL4LQ96MY1 436 aaPredicted RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 FER1L6Q2WGJ9 1857 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 PHLPP1O60346 1717 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 DNAJC25-GNG10A0A024R161 153 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 PTPMT1Q8WUK0 201 aaPredicted RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 ARHGDIGQ99819 225 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 CHST2Q9Y4C5 530 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 LOC107986453A0A1B0GWG9 222 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 TO15178 435 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 FCGR3BO75015 233 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 FCN2Q15485 313 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 DGAT2L6Q6ZPD8 337 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 LHFPL2Q6ZUX7 228 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 MED1Q15648 1581 aaPredicted RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 ATP1B1P05026 303 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 TMUB2Q71RG4 321 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 KMT5CQ86Y97 462 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 OR1L3Q8NH93 324 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 UBTD2Q8WUN7 234 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 OPALINQ96PE5 141 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 RTN4RQ9BZR6 473 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 IL17BQ9UHF5 180 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 MN1Q10571 1320 aaPredicted RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 M0QZQ0 153 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 ADAT1Q9BUB4 502 aaKnown RBP11.28□□□□□ -0.6
CHD3-203ENST00000380358 FAM53CQ9NYF3 392 aa11.28□□□□□ -0.6
CHD3-203ENST00000380358 CGB1A6NKQ9 187 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 HYAL3O43820 417 aaPredicted RBP11.27□□□□□ -0.6
CHD3-203ENST00000380358 CST7O76096 145 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 CD80P33681 288 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 C3AR1Q16581 482 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 ANGPTL6Q8NI99 470 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms