RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 RBBP9O75884 186 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 FCER2P06734 321 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 HCKP08631 526 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 PATE4P0C8F1 98 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 ZNF708P17019 499 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 CTSSP25774 331 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 ZNF93P35789 620 aaPredicted RBP12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 CCL11P51671 97 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 BTG1P62324 171 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 HIST1H3AP68431 136 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 GUCA2AQ02747 115 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 CBX3Q13185 183 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 HYAL4Q2M3T9 481 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 PCGF3Q3KNV8 242 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 ZFP69Q49AA0 526 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 ZNF766Q5HY98 468 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 C1orf100Q5SVJ3 147 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 HIST2H3PS2Q5TEC6 136 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 HIST2H3AQ71DI3 136 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 FAM46BQ96A09 425 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 CALHM2Q9HA72 323 aa12.97□□□□□ -0.33
RAB3IP-203ENST00000378809 A0A0A6YYJ9 748 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 ANKRD20A5PA0PJZ0 165 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 TPPPO94811 219 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 APOC1P02654 83 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 CST2P09228 141 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 PRSS3P35030 304 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 SCRN3Q0VDG4 424 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 PMPCAQ10713 525 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 SLC10A1Q14973 349 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 AWAT2Q6E213 333 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 ZNF774Q6NX45 483 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 PGAP1Q75T13 922 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 CHMP1BQ7LBR1 199 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 SLC16A14Q7RTX9 510 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 FNDC9Q8TBE3 224 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 AKAP1Q92667 903 aaKnown RBP eCLIP12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 FYTTD1Q96QD9 318 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 DEFB127Q9H1M4 99 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 GPR35Q9HC97 309 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 NEK6Q9HC98 313 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 EMC3Q9P0I2 261 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 KIAA1549Q9HCM3 1950 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 DMXL1Q9Y485 3027 aa12.96□□□□□ -0.33
RAB3IP-203ENST00000378809 TNFRSF10AO00220 468 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 H2AFB2P0C5Z0 115 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 GABRA1P14867 456 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 ZNF32P17041 273 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 CCL1P22362 96 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 RAB35Q15286 201 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 RSPO4Q2I0M5 234 aaPredicted RBP12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 DMRTC1Q5HYR2 192 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 TMEM255AQ5JRV8 349 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 RIPPLY2Q5TAB7 128 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 TSPO2Q5TGU0 170 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 TUSC5Q8IXB3 177 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 ACBD4Q8NC06 268 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 GPER1Q99527 375 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 UQCC2Q9BRT2 126 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 ZMAT3Q9HA38 289 aaKnown RBP12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 PAQR5Q9NXK6 330 aaPredicted RBP12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 LIPGQ9Y5X9 500 aa12.96□□□□□ -0.34
RAB3IP-203ENST00000378809 NAP1L6A6NFF2 107 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 ALDOBP05062 364 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 CD37P11049 281 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 HTR5AP47898 357 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 CAPZA1P52907 286 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 RRAS2P62070 204 aaPredicted RBP12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 KCNJ8Q15842 424 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 RSPO1Q2MKA7 263 aaPredicted RBP12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 SFRP5Q5T4F7 317 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 ANGPTL5Q86XS5 388 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 LYPD6Q86Y78 171 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 ZNF101Q8IZC7 436 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 FAM109AQ8N4B1 249 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 ZFP62Q8NB50 900 aaPredicted RBP12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 TMEM178AQ8NBL3 297 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 OR14K1Q8NGZ2 314 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 AKR7LQ8NHP1 331 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 HAS2Q92819 552 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 TMEM45BQ96B21 275 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 LYZL4Q96KX0 146 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 C20orf85Q9H1P6 137 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 SLCO5A1Q9H2Y9 848 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 ZNF552Q9H707 407 aaPredicted RBP12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 BEX1Q9HBH7 125 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 MED13Q9UHV7 2174 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 METTL21EPA6NDL7 271 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 H7C417 338 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 OTX1P32242 354 aaPredicted RBP12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 NOVA1P51513 510 aaKnown RBP12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 C9orf135Q5VTT2 229 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 ZNF529Q6P280 563 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 BTN2A1Q7KYR7 527 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 MCEMP1Q8IX19 187 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 OR1F12Q8NHA8 337 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 NPRL2Q8WTW4 380 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 RNF170Q96K19 258 aa12.95□□□□□ -0.34
RAB3IP-203ENST00000378809 OR10A2Q9H208 303 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms