RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 UXS1Q8NBZ7 420 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 ZPLD1Q8TCW7 415 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 Q96M85 177 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 ADAD1Q96M93 576 aaKnown RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 ZNF436Q9C0F3 470 aaPredicted RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 COMMD4Q9H0A8 199 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 WDR76Q9H967 626 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 LIN7BQ9HAP6 207 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 GPN1Q9HCN4 374 aaPredicted RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 CLCF1Q9UBD9 225 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 OR5V1Q9UGF6 321 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 MRM2Q9UI43 246 aaKnown RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 RCE1Q9Y256 329 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 TMA7Q9Y2S6 64 aaKnown RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 KLF2Q9Y5W3 355 aaPredicted RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 FKBP7Q9Y680 259 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 ANKHD1Q8IWZ3 2542 aaKnown RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 MPDZO75970 2070 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 ACOD1A6NK06 481 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 GABRA1P14867 456 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 CXCL3P19876 107 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 KLK2P20151 261 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 FAUP35544 74 aaKnown RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 KRTAP10-9P60411 292 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 SSBP1Q04837 148 aaKnown RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 DBPQ10586 325 aaPredicted RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 BAMBIQ13145 260 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 LGALSLQ3ZCW2 172 aaPredicted RBP10.92□□□□□ -0.66
VRK3-202ENST00000377011 TMEM69Q5SWH9 247 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 RIPPLY2Q5TAB7 128 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 EEF1A1P5Q5VTE0 462 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 LIPNQ5VXI9 398 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 ESPNLQ6ZVH7 1005 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 LRRTM1Q86UE6 522 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 ACBD4Q8NC06 268 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 OR11H4Q8NGC9 324 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 OR52I2Q8NH67 350 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 SYNPRQ8TBG9 265 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 ADAM19Q9H013 955 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 SLC17A5Q9NRA2 495 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 SDHAF3Q9NRP4 125 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 TAS2R8Q9NYW2 309 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 TAS2R5Q9NYW4 299 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 COQ3Q9NZJ6 369 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 GRHPRQ9UBQ7 328 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 MAB21L2Q9Y586 359 aa10.92□□□□□ -0.66
VRK3-202ENST00000377011 OTOGQ6ZRI0 2925 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 SPG11Q96JI7 2443 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 MBD3L4A6NDZ8 208 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 MBD3L3A6NE82 208 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 MBD3L5A6NJ08 208 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 ZSCAN5BA6NJL1 495 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 OR4C45A6NMZ5 311 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 BLOC1S5-TXNDC5H3BN57 136 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 KHDRBS3O75525 346 aaKnown RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 MT-ATP6P00846 226 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 HIST1H2ABP04908 130 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 GIPP09681 153 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 IFNGR1P15260 489 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 POU3F2P20265 443 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 BMP5P22003 454 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 P2RX1P51575 399 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 RNASE12Q5GAN4 147 aaKnown RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 TOR2AQ5JU69 321 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 GLDNQ6ZMI3 551 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 HIST3H2AQ7L7L0 130 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 PRSS45Q7RTY3 260 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 C10orf53Q8N6V4 93 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 ZNF433Q8N7K0 673 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 MBD3L2Q8NHZ7 208 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 GPR148Q8TDV2 347 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 GPR119Q8TDV5 335 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 ASB17Q8WXJ9 295 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 HIST1H2ACQ93077 130 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 DNAJA3Q96EY1 480 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 ADGRG7Q96K78 797 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 FRRS1LQ9P0K9 344 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 LAMP5Q9UJQ1 280 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 AKAP6Q13023 2319 aa10.91□□□□□ -0.66
VRK3-202ENST00000377011 MAP1AP78559 2803 aaPredicted RBP10.91□□□□□ -0.66
VRK3-202ENST00000377011 A0A0J9YW62 118 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 TMEM72A0PK05 275 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 PRR32B1ATL7 298 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 EIF4E2O60573 245 aaKnown RBP10.9□□□□□ -0.66
VRK3-202ENST00000377011 AQP8O94778 261 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 NDUFB6O95139 128 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 OR8G3PP0DMU2 310 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 IGFBP2P18065 325 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 ALOX5APP20292 161 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 TAS2R20P59543 309 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 ZP1P60852 638 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 EGR4Q05215 589 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 RPL18Q07020 188 aaKnown RBP10.9□□□□□ -0.66
VRK3-202ENST00000377011 PM20D2Q8IYS1 436 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 GTPBP8Q8N3Z3 284 aaPredicted RBP10.9□□□□□ -0.66
VRK3-202ENST00000377011 ZNF511Q8NB15 262 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 OR2G2Q8NGZ5 317 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 FNDC9Q8TBE3 224 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 ASB13Q8WXK3 278 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 INTS12Q96CB8 462 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms