RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SCGB1D2O95969 90 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 RPLP2P05387 115 aaKnown RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CTLA4P16410 223 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 NDUFB7P17568 137 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 LAG3P18627 525 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 GDI1P31150 447 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 GJA4P35212 333 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 NR0B1P51843 470 aaKnown RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 RAB5BP61020 215 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF616Q08AN1 781 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ENPP2Q13822 863 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 GPR18Q14330 331 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ELAVL3Q14576 367 aaKnown RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 GAB4Q2WGN9 574 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 C2orf27AQ580R0 203 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 VWA2Q5GFL6 755 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 PYY3Q5JQD4 70 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 RPL13AP3Q6NVV1 102 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 LINC00114Q6XXX2 140 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 DPY19L2P2Q6ZN68 376 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 C16orf47Q6ZP98 133 aaPredicted RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 Q6ZRG5 221 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 LRP11Q86VZ4 500 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF595Q8IYB9 648 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 PRSS58Q8IYP2 241 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 EID2Q8N6I1 236 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CDRT4Q8N9R6 151 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 NAXEQ8NCW5 288 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SLC26A10Q8NG04 563 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 RPS4Y2Q8TD47 263 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CD300LFQ8TDQ1 290 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ST7LQ8TDW4 575 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CCDC107Q8WV48 283 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 MITD1Q8WV92 249 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 RNF141Q8WVD5 230 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 GAL3ST3Q96A11 431 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM230Q96A57 120 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF764Q96H86 408 aaPredicted RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 REEP6Q96HR9 211 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 GGACTQ9BVM4 153 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 NUDT9Q9BW91 350 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SUCNR1Q9BXA5 334 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 POTEKPQ9BYX7 375 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 OR11A1Q9GZK7 315 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SH3BGRL3Q9H299 93 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SPACA1Q9HBV2 294 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 GLRX2Q9NS18 164 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 LANCL2Q9NS86 450 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CENPMQ9NSP4 180 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 PARPBPQ9NWS1 579 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 MRPL22Q9NWU5 206 aaKnown RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF581Q9P0T4 197 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 LPAR3Q9UBY5 353 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CACFD1Q9UGQ2 172 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 DHDHQ9UQ10 334 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ETV7Q9Y603 341 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SEC16AO15027 2179 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 KIF26BQ2KJY2 2108 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 C5orf63A6NC05 138 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 IFNL4K9M1U5 179 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SOCS1O15524 211 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 RAD51DO75771 328 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF432O94892 652 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 NUDT14O95848 222 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CD14P08571 375 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SLC25A4P12235 298 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 TPT1P13693 172 aaKnown RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 S1PR1P21453 382 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 IGFALSP35858 605 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ACTR1BP42025 376 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 GRK6P43250 576 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 NDUFA6P56556 154 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ACTR1AP61163 376 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 MRPS10P82664 201 aaKnown RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 COTL1Q14019 142 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 NFATC4Q14934 902 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 PPA1Q15181 289 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF74Q16587 644 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 C10orf91Q5T1B1 145 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ADAMTSL4Q6UY14 1074 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SPNS3Q6ZMD2 512 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 PGAP1Q75T13 922 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SLC25A42Q86VD7 318 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF383Q8NA42 475 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CAMKVQ8NCB2 501 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 OR13C3Q8NGS6 347 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF417Q8TAU3 575 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 RNF128Q8TEB7 428 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 OR1E3Q8WZA6 343 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SLC22A18Q96BI1 424 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 FGGYQ96C11 551 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZDHHC12Q96GR4 267 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 KIRREL1Q96J84 757 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 DEFB118Q96PH6 123 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 PHB2Q99623 299 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 RARRES2Q99969 163 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ABHD14AQ9BUJ0 271 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ST6GALNAC5Q9BVH7 336 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SEC11CQ9BY50 192 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZBP1Q9H171 429 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms