RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 HEPN1Q6WQI6 88 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 PTCHD4Q6ZW05 846 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CXXC5Q7LFL8 322 aaKnown RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 OLIG3Q7RTU3 272 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF321PQ8N8H1 164 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 FADS6Q8N9I5 356 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CPEB3Q8NE35 698 aaKnown RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CHST11Q9NPF2 352 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 KRCC1Q9NPI7 259 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 RLIMQ9NVW2 624 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 LRFN1Q9P244 771 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF780BQ9Y6R6 833 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 A0A1B0GTI1 187 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 A0A1W2PR48 441 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 LRRN3E7EW58 273 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 GABRPO00591 440 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 IL18BPO95998 194 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF14P17017 642 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 HLA-GP17693 338 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 MPIP34949 423 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 XCR1P46094 333 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CAV2P51636 162 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CARD18P57730 90 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 JOSD1Q15040 202 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF750Q32MQ0 723 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 AMZ1Q400G9 498 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 RPS26P11Q5JNZ5 115 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 HIST2H3PS2Q5TEC6 136 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ABLIM2Q6H8Q1 611 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 OR4C11Q6IEV9 310 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 LPCAT3Q6P1A2 487 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 OR5T3Q8NGG3 340 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ADAMTS18Q8TE60 1221 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 GTPBP3Q969Y2 492 aaKnown RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 C14orf79Q96F83 325 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 SNHG12Q9BXW3 62 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 BHLHE41Q9C0J9 482 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 WDR13Q9H1Z4 485 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 HRASLSQ9HDD0 168 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 SOHLH2Q9NX45 425 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ABI3Q9P2A4 366 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ACACBO00763 2458 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 A0A0A6YYC8 382 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 F5H5P2 479 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 I3L1I5 382 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 NXPH2O95156 264 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 WISP1O95388 367 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 FAM157CP0CG43 387 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 RPS4Y1P22090 263 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 S100A2P29034 98 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 F2RL1P55085 397 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 STXBP1P61764 594 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 RTL6Q6ICC9 239 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 FAM71E1Q6IPT2 247 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ASB18Q6ZVZ8 466 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ZFP62Q8NB50 900 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ST6GALNAC3Q8NDV1 305 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 OR5D16Q8NGK9 328 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 NUBPLQ8TB37 319 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 LMF2Q9BU23 707 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 MFFQ9GZY8 342 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 USP9XQ93008 2570 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 NF1P21359 2839 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 H3BN98 237 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 HRKO00198 91 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 RPP14O95059 124 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 SERPINA7P05543 415 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 CT62P0C5K7 136 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 OR12D1P0DN82 309 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 OSMP13725 252 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 MAGEB1P43366 347 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ARL4DP49703 201 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 SNTB2Q13425 540 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 MELKQ14680 651 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 IFI44LQ53G44 452 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 LANCL3Q6ZV70 420 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 VRK2Q86Y07 508 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 PAQR4Q8N4S7 273 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 UBAC2Q8NBM4 344 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 SLC35G5Q96KT7 338 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 PTCHD1Q96NR3 888 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 SIGLEC12Q96PQ1 595 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 TSSK6Q9BXA6 273 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 METTL8Q9H825 291 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ADAP2Q9NPF8 381 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ACER3Q9NUN7 267 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 GRHPRQ9UBQ7 328 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 SPACA6W5XKT8 324 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 SETXQ7Z333 2677 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ANKRD20A5PA0PJZ0 165 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 RNASET2O00584 256 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 GCM2O75603 506 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 IGHA1P01876 353 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 CD14P08571 375 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 CD3GP09693 182 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 FBXO45P0C2W1 286 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF888P0CJ79 500 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ACP2P11117 423 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 PTNP21246 168 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 TLX1P31314 330 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms