RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR5AS1Q8N127 324 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 OR2V2Q96R30 315 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 RPS10P5Q9NQ39 176 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 PRSS56P0CW18 603 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 GLYATL3Q5SZD4 288 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MRGPREQ86SM8 312 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CACNG8Q8WXS5 425 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FYTTD1Q96QD9 318 aaKnown RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ELL3Q9HB65 397 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DDTLA6NHG4 134 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 F5H5K5 113 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ETHE1O95571 254 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SMIM18P0DKX4 95 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 APOBEC3AP31941 199 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SELENOPP49908 381 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CLDN12P56749 244 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 RLN3Q8WXF3 142 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DNAJC27Q9NZQ0 273 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 APOBEC3BQ9UH17 382 aaKnown RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FNDC10F2Z333 226 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 AKR7A3O95154 331 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM225BP0DP42 221 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 EFEMP1Q12805 493 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FAM71F2Q6NXP2 309 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MEGF9Q9H1U4 602 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CA1P00915 261 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 RPS4Y2Q8TD47 263 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MOB3AQ96BX8 217 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 LRRC61Q9BV99 259 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 RAB33BQ9H082 229 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 AKAP12Q02952 1782 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ERI3O43414 337 aaKnown RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TRGC2P03986 189 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 HOXD13P35453 343 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 OR12D2P58182 307 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DGAT2L6Q6ZPD8 337 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 KCNE1BA0A087WTH5 132 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SHISA9B4DS77 424 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 PRKNO60260 465 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DUSP3P51452 185 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 GANABQ14697 944 aaKnown RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 JOSD1Q15040 202 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 KRBOX4Q5JUW0 171 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 Q6ZSR9 355 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 HSPB7Q9UBY9 170 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SNX11Q9Y5W9 270 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 M0R2Z0 102 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CD74P04233 296 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 GPR3P46089 330 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 MTPNP58546 118 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 DCAF12L1Q5VU92 463 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF547Q8IVP9 402 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FAM58AQ8N1B3 248 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TEPSINQ96N21 525 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 ATXN7L1Q9ULK2 861 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TRBV2A0A0J9YWF9 115 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TCRBV21S2A2A0A5A6 115 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 KBTBD11O94819 623 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CD37P11049 281 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 AKR1C3P42330 323 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 PTGFRP43088 359 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 KIR2DL2P43627 348 aaPredicted RBP3.41□□□□□ -1.86
SYNE1-207ENST00000367255 HERVK_113P61574 105 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 HSD11B1LQ7Z5J1 315 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 PEX11GQ96HA9 241 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TXNIPQ9H3M7 391 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 NTMQ9P121 344 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 OR1A2Q9Y585 309 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SOCS2O14508 198 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 PRR35P0CG20 571 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TNFRSF1BP20333 461 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TGFBR1P36897 503 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FMODQ06828 376 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FBXL22Q6P050 247 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FAM90A1Q86YD7 464 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FOXJ1Q92949 421 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FOXJ2Q9P0K8 574 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 LILRB2Q8N423 598 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM45BQ96B21 275 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM19Q96HH6 336 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TPPP3Q9BW30 176 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SLC26A1Q9H2B4 701 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 WDR76Q9H967 626 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 GLRX2Q9NS18 164 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CD8B2A6NJW9 211 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 FAM183AA6NL82 134 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 B4GALNT1Q00973 533 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 UBE2V2Q15819 145 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 C11orf87Q6NUJ2 197 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 OR5AR1Q8NGP9 310 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SGCZQ96LD1 299 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 SELENOIQ9C0D9 397 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 HIF1ANQ9NWT6 349 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 KIF1BO60333 1816 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 M0QZ24 198 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 CRISP2P16562 243 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 TNFSF4P23510 183 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 PPP1CBP62140 327 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 RNF44Q7L0R7 432 aa3.41□□□□□ -1.86
SYNE1-207ENST00000367255 OR4C16Q8NGL9 310 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms