RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 MRPL15Q9P015 296 aaKnown RBP12.4□□□□□ -0.42
CTSD-202ENST00000367196 RNF7Q9UBF6 113 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 BAIAP2Q9UQB8 552 aa12.4□□□□□ -0.42
CTSD-202ENST00000367196 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.39□□□□□ -0.43
CTSD-202ENST00000367196 IGHV3-64DA0A0J9YX35 117 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 KIR2DS1A0A191URI9 304 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 GGT3PA6NGU5 568 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 CD300LBA8K4G0 201 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 TNFRSF11BO00300 401 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 FAM20BO75063 409 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 CCNB2O95067 398 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 PLATP00750 562 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 HMGA2P52926 109 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 BLVRAP53004 296 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 MAB21L1Q13394 359 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 TAF13Q15543 124 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 GPR157Q5UAW9 335 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 DEFB107AQ8IZN7 70 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 DACT3Q96B18 629 aaPredicted RBP12.39□□□□□ -0.43
CTSD-202ENST00000367196 MAP6Q96JE9 813 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 EGLN3Q9H6Z9 239 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 SP140LQ9H930 580 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 TBC1D23Q9NUY8 699 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 IL20Q9NYY1 176 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 ARL2BPQ9Y2Y0 163 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 PCDHGB1Q9Y5G3 927 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 LYVE1Q9Y5Y7 322 aa12.39□□□□□ -0.43
CTSD-202ENST00000367196 MGAM2Q2M2H8 2515 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 BHLHE40O14503 412 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 XRCC2O43543 280 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 NDUFA2O43678 99 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 IFNGP01579 166 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 LIPFP07098 398 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 IGHV4-38-2P0DP08 117 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 EGR1P18146 543 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 CA6P23280 308 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 FMO3P31513 532 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 OTX1P32242 354 aaPredicted RBP12.38□□□□□ -0.43
CTSD-202ENST00000367196 PYCR1P32322 319 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 MSX2P35548 267 aaPredicted RBP12.38□□□□□ -0.43
CTSD-202ENST00000367196 RBMXP38159 391 aaKnown RBP12.38□□□□□ -0.43
CTSD-202ENST00000367196 PRSS12P56730 875 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 WDR25Q64LD2 544 aaPredicted RBP12.38□□□□□ -0.43
CTSD-202ENST00000367196 RASSF6Q6ZTQ3 369 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 BCL6BQ8N143 479 aaPredicted RBP12.38□□□□□ -0.43
CTSD-202ENST00000367196 OR9Q2Q8NGE9 314 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 DUX5Q96PT3 197 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 MMADHCQ9H3L0 296 aaPredicted RBP12.38□□□□□ -0.43
CTSD-202ENST00000367196 MUC13Q9H3R2 512 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 UFSP2Q9NUQ7 469 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 C14orf119Q9NWQ9 140 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 ACTR3BQ9P1U1 418 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 ERVK-18Q9QC07 812 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 COMMD3-BMI1R4GMX3 469 aa12.38□□□□□ -0.43
CTSD-202ENST00000367196 TRAV38-1A0A0B4J264 116 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 POM121CA8CG34 1229 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 ZNF878C9JN71 531 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 LGALS8O00214 317 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 PTBP3O95758 552 aaKnown RBP12.37□□□□□ -0.43
CTSD-202ENST00000367196 SPARCP09486 303 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 DDOSTP39656 456 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 PSMB10P40306 273 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 PMELP40967 661 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 SLC15A1P46059 708 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 ENTPD1P49961 510 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
CTSD-202ENST00000367196 ZNF92Q03936 586 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 C11orf91Q3C1V1 193 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 SNAI3Q3KNW1 292 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 PRAMEF6Q5VXH4 476 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 DCXRQ7Z4W1 244 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 ARHGAP24Q8N264 748 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 LNX2Q8N448 690 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 FITM2Q8N6M3 262 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 CYB561A3Q8NBI2 242 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 OR2T33Q8NG76 320 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 ZNF48Q96MX3 618 aaPredicted RBP12.37□□□□□ -0.43
CTSD-202ENST00000367196 TECTBQ96PL2 329 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 KCNJ15Q99712 375 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 BTBD10Q9BSF8 475 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 MAGIXQ9H6Y5 334 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 ZNF696Q9H7X3 374 aa12.37□□□□□ -0.43
CTSD-202ENST00000367196 IGHV3OR16-10A0A075B7F0 116 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 TVP23AA6NH52 213 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 APOC1P02654 83 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 ZNF3P17036 446 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 MAGEA2P43356 314 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 SLC9A3R2Q15599 337 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 OR8B8Q15620 311 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 TEX30Q5JUR7 227 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 PRR31Q5SQ13 230 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 NAA40Q86UY6 237 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 PNLDC1Q8NA58 520 aaKnown RBP12.36□□□□□ -0.43
CTSD-202ENST00000367196 SLC37A3Q8NCC5 494 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 OR10S1Q8NGN2 331 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 OR2AE1Q8NHA4 323 aa12.36□□□□□ -0.43
CTSD-202ENST00000367196 SLAMF6Q96DU3 332 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms