RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 CEPT1Q9Y6K0 416 aa17.89■□□□□ 0.45
SHISA4-201ENST00000362011 CCDC160A6NGH7 325 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 H3BSA7 217 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 TBX1O43435 398 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 NOL3O60936 208 aaKnown RBP17.88■□□□□ 0.45
SHISA4-201ENST00000362011 ZFPL1O95159 310 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 IGLV1-44P01699 117 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 TTRP02766 147 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 LCATP04180 440 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 UBCP0CG48 685 aaKnown RBP17.88■□□□□ 0.45
SHISA4-201ENST00000362011 CDSNQ15517 529 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 TMEM244Q5VVB8 128 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 MYPOPQ86VE0 399 aaPredicted RBP17.88■□□□□ 0.45
SHISA4-201ENST00000362011 TMEM203Q969S6 136 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 RBM38Q9H0Z9 239 aaKnown RBP17.88■□□□□ 0.45
SHISA4-201ENST00000362011 OR51E2Q9H255 320 aa17.88■□□□□ 0.45
SHISA4-201ENST00000362011 AIREO43918 545 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 RGS9O75916 674 aaPredicted RBP17.87■□□□□ 0.45
SHISA4-201ENST00000362011 CLDN14O95500 239 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 HLA-DPB1P04440 258 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 CCL2P13500 99 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 ODF4Q2M2E3 257 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 YIF1BQ5BJH7 314 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 OR52H1Q8NGJ2 320 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 C1QTNF5Q9BXJ0 243 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 NAA50Q9GZZ1 169 aaKnown RBP17.87■□□□□ 0.45
SHISA4-201ENST00000362011 OR10A2Q9H208 303 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 SSR3Q9UNL2 185 aa17.87■□□□□ 0.45
SHISA4-201ENST00000362011 ADGRG4Q8IZF6 3080 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 IGHV1-18A0A0C4DH31 117 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 GABARAPO95166 117 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 SERPINA3P01011 423 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 ISG15P05161 165 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 CECR9P0C854 216 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 ACHEP22303 614 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 CRYBB2P43320 205 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 ZNF83P51522 516 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 TMBIM6P55061 237 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 SORDQ00796 357 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 FABP5Q01469 135 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 SNAI3Q3KNW1 292 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 ALKBH2Q6NS38 261 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 SLC16A12Q6ZSM3 486 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 ZNF420Q8TAQ5 688 aaPredicted RBP17.86■□□□□ 0.45
SHISA4-201ENST00000362011 CHCHD6Q9BRQ6 235 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 FAM192AQ9GZU8 254 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 SLC24A3Q9HC58 644 aa17.86■□□□□ 0.45
SHISA4-201ENST00000362011 EXOSC4Q9NPD3 245 aaKnown RBP17.86■□□□□ 0.45
SHISA4-201ENST00000362011 AKAP9Q99996 3911 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 A0A0U1RQV5 110 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 LOC107986453A0A1B0GWG9 222 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 TRDV1A0A1B0GX56 115 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 M0R1B8 84 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 P2RY10O00398 339 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 GABRPO00591 440 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 GALP22466 123 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 NR4A1P22736 598 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 CD200R1LQ6Q8B3 271 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 GDPGP1Q6ZNW5 385 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 COLCA1Q6ZS62 124 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 OR13C5Q8NGS8 318 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 ABHD4Q8TB40 342 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 GPR148Q8TDV2 347 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 RAB2BQ8WUD1 216 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 RGP1Q92546 391 aaPredicted RBP17.85■□□□□ 0.45
SHISA4-201ENST00000362011 APOBEC3DQ96AK3 386 aaPredicted RBP17.85■□□□□ 0.45
SHISA4-201ENST00000362011 LURAP1Q96LR2 239 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 BCL7BQ9BQE9 202 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 NPAP1Q9NZP6 1156 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 ZNF319Q9P2F9 582 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 EIF3KQ9UBQ5 218 aaKnown RBP17.85■□□□□ 0.45
SHISA4-201ENST00000362011 HHLA2Q9UM44 414 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 F8P00451 2351 aa17.85■□□□□ 0.45
SHISA4-201ENST00000362011 LOC100506127A0A0U1RQW1 187 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 A0A1B0GVI7 797 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 XRCC2O43543 280 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 GPX5O75715 221 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 ANOS1P23352 680 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 RPS11P62280 158 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHISA4-201ENST00000362011 COMMD2Q86X83 199 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 WFDC8Q8IUA0 241 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 RDH10Q8IZV5 341 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 PAQR4Q8N4S7 273 aaPredicted RBP17.84■□□□□ 0.45
SHISA4-201ENST00000362011 OR51E1Q8TCB6 317 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 RPL3LQ92901 407 aaKnown RBP17.84■□□□□ 0.45
SHISA4-201ENST00000362011 ISOC1Q96CN7 298 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 ZC3HAV1LQ96H79 300 aaKnown RBP17.84■□□□□ 0.45
SHISA4-201ENST00000362011 MED18Q9BUE0 208 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 NDRG3Q9UGV2 375 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 RSL24D1Q9UHA3 163 aaKnown RBP17.84■□□□□ 0.45
SHISA4-201ENST00000362011 POLQO75417 2590 aa17.84■□□□□ 0.45
SHISA4-201ENST00000362011 C5orf63A6NC05 138 aa17.83■□□□□ 0.44
SHISA4-201ENST00000362011 J3QW42 95 aa17.83■□□□□ 0.44
SHISA4-201ENST00000362011 THBDP07204 575 aa17.83■□□□□ 0.44
SHISA4-201ENST00000362011 WNT5AP41221 380 aa17.83■□□□□ 0.44
SHISA4-201ENST00000362011 TFF3Q07654 80 aa17.83■□□□□ 0.44
SHISA4-201ENST00000362011 GFOD2Q3B7J2 385 aa17.83■□□□□ 0.44
SHISA4-201ENST00000362011 ACSM3Q53FZ2 586 aa17.83■□□□□ 0.44
SHISA4-201ENST00000362011 FOXB2Q5VYV0 432 aa17.83■□□□□ 0.44
SHISA4-201ENST00000362011 SEZ6L2Q6UXD5 910 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms