RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 TIGD3Q6B0B8 471 aa13.46□□□□□ -0.25
COL11A2-202ENST00000361917 MARCH1Q8TCQ1 289 aa13.46□□□□□ -0.25
COL11A2-202ENST00000361917 CDCA4Q9BXL8 241 aa13.46□□□□□ -0.25
COL11A2-202ENST00000361917 GDF2Q9UK05 429 aaPredicted RBP13.46□□□□□ -0.25
COL11A2-202ENST00000361917 C1QBP02746 253 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 FCER1GP30273 86 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 FBXL6Q8N531 539 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.26
COL11A2-202ENST00000361917 SIGLEC11Q96RL6 698 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.26
COL11A2-202ENST00000361917 MYO18AQ92614 2054 aaKnown RBP13.46□□□□□ -0.26
COL11A2-202ENST00000361917 OR5H15A6NDH6 313 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 OR5H1A6NKK0 313 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 ANGPTL7O43827 346 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 OR2F2O95006 317 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 RD3LP0DJH9 198 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 ERHP84090 104 aaKnown RBP13.46□□□□□ -0.26
COL11A2-202ENST00000361917 OR2F1Q13607 317 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 EXOSC2Q13868 293 aaKnown RBP13.46□□□□□ -0.26
COL11A2-202ENST00000361917 S1PR3Q99500 378 aa13.46□□□□□ -0.26
COL11A2-202ENST00000361917 IGLV3-27P01718 113 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 RPL12P30050 165 aaKnown RBP13.45□□□□□ -0.26
COL11A2-202ENST00000361917 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
COL11A2-202ENST00000361917 TCTN3Q6NUS6 607 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 LSRQ86X29 649 aaPredicted RBP13.45□□□□□ -0.26
COL11A2-202ENST00000361917 SMIM19Q96E16 107 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 MRGPRX4Q96LA9 322 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 JAM3Q9BX67 310 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 C2CD4DB7Z1M9 353 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 JTBO76095 146 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 TAS2R45P59539 299 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 ACOT6Q3I5F7 207 aaPredicted RBP13.45□□□□□ -0.26
COL11A2-202ENST00000361917 A0A1W2PPC4 97 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 SHISA8B8ZZ34 492 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 CD80P33681 288 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 SLC25A26Q70HW3 274 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 VASH2Q86V25 355 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 CCR2P41597 374 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 PIGPP57054 158 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 PRSS36Q5K4E3 855 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 ELFN2Q5R3F8 820 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 PXDC1Q5TGL8 231 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 CYHR1Q6ZMK1 362 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 ACOT7LQ6ZUV0 252 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 AKR7LQ8NHP1 331 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 CORO2AQ92828 525 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 COMMD5Q9GZQ3 224 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 DLL4Q9NR61 685 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 COL16A1Q07092 1604 aaPredicted RBP13.45□□□□□ -0.26
COL11A2-202ENST00000361917 IFITM5A6NNB3 132 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 OR4E1P0C645 316 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 SRFP11831 508 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 GPM6AP51674 278 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 CAMKMTQ7Z624 323 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 SLC25A19Q9HC21 320 aa13.45□□□□□ -0.26
COL11A2-202ENST00000361917 STRAPQ9Y3F4 350 aaKnown RBP13.45□□□□□ -0.26
COL11A2-202ENST00000361917 ZNF354AO60765 605 aaPredicted RBP13.44□□□□□ -0.26
COL11A2-202ENST00000361917 PSMB6P28072 239 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 ZNF787Q6DD87 383 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 DRAM2Q6UX65 266 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 RYDENQ9NUL5 291 aaKnown RBP13.44□□□□□ -0.26
COL11A2-202ENST00000361917 TMEM30AQ9NV96 361 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 NDRG3Q9UGV2 375 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 ST3GAL6Q9Y274 331 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 H7BYZ3 331 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 CEACAM5P06731 702 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 GABRB1P18505 474 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 FZD2Q14332 565 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 CDK5R1Q15078 307 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 RPUSD3Q6P087 351 aaKnown RBP13.44□□□□□ -0.26
COL11A2-202ENST00000361917 OR52B4Q8NGK2 314 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 OR5M9Q8NGP3 310 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 FGF14Q92915 247 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 GNPNAT1Q96EK6 184 aaPredicted RBP13.44□□□□□ -0.26
COL11A2-202ENST00000361917 TAAR6Q96RI8 345 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 FBXO4Q9UKT5 387 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 ZNF835Q9Y2P0 537 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 FAM96BQ9Y3D0 163 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 ARL2-SNX15V9GYD0 113 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 ZNF727A8MUV8 499 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 CLEC12BQ2HXU8 276 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 PRR27Q6MZM9 219 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 RELL2Q8NC24 303 aaPredicted RBP13.44□□□□□ -0.26
COL11A2-202ENST00000361917 OR10AD1Q8NGE0 317 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 NUDT9Q9BW91 350 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 FAM117AQ9C073 453 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
COL11A2-202ENST00000361917 PDGFBP01127 241 aaPredicted RBP13.43□□□□□ -0.26
COL11A2-202ENST00000361917 PNLIPRP2P54317 469 aa13.43□□□□□ -0.26
COL11A2-202ENST00000361917 SLC39A7Q92504 469 aa13.43□□□□□ -0.26
COL11A2-202ENST00000361917 IP6K3Q96PC2 410 aa13.43□□□□□ -0.26
COL11A2-202ENST00000361917 ZNF629Q9UEG4 869 aaPredicted RBP13.43□□□□□ -0.26
COL11A2-202ENST00000361917 OR5I1Q13606 314 aa13.43□□□□□ -0.26
COL11A2-202ENST00000361917 RCL1Q9Y2P8 373 aaKnown RBP13.43□□□□□ -0.26
COL11A2-202ENST00000361917 FIGNL2A6NMB9 653 aa13.43□□□□□ -0.26
COL11A2-202ENST00000361917 OR5H8P0DN80 308 aa13.43□□□□□ -0.26
COL11A2-202ENST00000361917 BPIFB3P59826 476 aa13.43□□□□□ -0.26
COL11A2-202ENST00000361917 MRPL58Q14197 206 aaKnown RBP13.43□□□□□ -0.26
COL11A2-202ENST00000361917 ZNF628Q5EBL2 1059 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms