RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 OR8B8Q15620 311 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 TAF9Q16594 264 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 FGD3Q5JSP0 725 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 OR6V1Q8N148 313 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 SLC26A10Q8NG04 563 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 ERMAPQ96PL5 475 aaPredicted RBP17.47■□□□□ 0.39
CD47-202ENST00000361309 ATF6BQ99941 703 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 SIRPDQ9H106 197 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 AURKCQ9UQB9 309 aa17.47■□□□□ 0.39
CD47-202ENST00000361309 UNC119BA6NIH7 251 aa17.46■□□□□ 0.39
CD47-202ENST00000361309 CLPXO76031 633 aa17.46■□□□□ 0.39
CD47-202ENST00000361309 PROK1P58294 105 aa17.46■□□□□ 0.39
CD47-202ENST00000361309 TRAP1Q12931 704 aaKnown RBP17.46■□□□□ 0.39
CD47-202ENST00000361309 ECH1Q13011 328 aa17.46■□□□□ 0.39
CD47-202ENST00000361309 MRPL21Q7Z2W9 205 aaKnown RBP17.46■□□□□ 0.39
CD47-202ENST00000361309 ARPINQ7Z6K5 226 aa17.46■□□□□ 0.39
CD47-202ENST00000361309 CAPN7Q9Y6W3 813 aa17.46■□□□□ 0.39
CD47-202ENST00000361309 TRBV4-1A0A0J9YWV2 114 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 A0A0U1RQK1 487 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 IER3P46695 156 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 ARF6P62330 175 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 SEC23BQ15437 767 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 SMARCD3Q6STE5 483 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 C1QL4Q86Z23 238 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 SCCPDHQ8NBX0 429 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 OR2AJ1Q8NGZ0 328 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 NMNAT3Q96T66 252 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 ADAT1Q9BUB4 502 aaKnown RBP17.45■□□□□ 0.38
CD47-202ENST00000361309 SLC22A4Q9H015 551 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 TCF7L1Q9HCS4 588 aa17.45■□□□□ 0.38
CD47-202ENST00000361309 PNRC2Q9NPJ4 139 aaKnown RBP17.45■□□□□ 0.38
CD47-202ENST00000361309 NOP16Q9Y3C1 178 aaKnown RBP17.45■□□□□ 0.38
CD47-202ENST00000361309 TET2Q6N021 2002 aaPredicted RBP17.45■□□□□ 0.38
CD47-202ENST00000361309 TRAV38-1A0A0B4J264 116 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 OOEPA6NGQ2 149 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 SLC22A31A6NKX4 558 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 CD300LBA8K4G0 201 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 NME4O00746 187 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 FCN3O75636 299 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 PTBP3O95758 552 aaKnown RBP17.44■□□□□ 0.38
CD47-202ENST00000361309 TSPAN15O95858 294 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 GYPAP02724 150 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 TPTEP56180 551 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 SLC36A3Q495N2 470 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 CGB2Q6NT52 195 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 LDLRAD3Q86YD5 345 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 PDZD9Q8IXQ8 264 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 FAM162AQ96A26 154 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 TRIM36Q9NQ86 728 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 RPRD1BQ9NQG5 326 aaKnown RBP17.44■□□□□ 0.38
CD47-202ENST00000361309 FGFR1OP2Q9NVK5 253 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 NDUFAF4Q9P032 175 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 CYB5R1Q9UHQ9 305 aa17.44■□□□□ 0.38
CD47-202ENST00000361309 FAM32AQ9Y421 112 aaKnown RBP17.44■□□□□ 0.38
CD47-202ENST00000361309 NDUFA2O43678 99 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 GMDSO60547 372 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 RENP00797 406 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 NCK1P16333 377 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 GSK3BP49841 420 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 SLC7A2P52569 658 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 ZNF92Q03936 586 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 BTN2A1Q7KYR7 527 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 PLPP7Q8NBV4 271 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 OR4K13Q8NH42 304 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 OR52J3Q8NH60 311 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 FN3KQ9H479 309 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 KRCC1Q9NPI7 259 aaPredicted RBP17.43■□□□□ 0.38
CD47-202ENST00000361309 C1orf123Q9NWV4 160 aa17.43■□□□□ 0.38
CD47-202ENST00000361309 M0R135 149 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 DVL1O14640 695 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 OR10H3O60404 316 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 HLA-DQA2P01906 255 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 HIST1H1CP16403 213 aaKnown RBP17.42■□□□□ 0.38
CD47-202ENST00000361309 RHCEP18577 417 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 GGT2P36268 569 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 SNAI3Q3KNW1 292 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 Q6ZSV7 163 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 ZNF826PQ6ZT77 177 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 ZBTB46Q86UZ6 589 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 FAM90A1Q86YD7 464 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 ZSCAN4Q8NAM6 433 aaPredicted RBP17.42■□□□□ 0.38
CD47-202ENST00000361309 OR2AE1Q8NHA4 323 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 FAM110DQ8TAY7 271 aaPredicted RBP17.42■□□□□ 0.38
CD47-202ENST00000361309 FANK1Q8TC84 345 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 ZNF799Q96GE5 643 aa17.42■□□□□ 0.38
CD47-202ENST00000361309 GGT3PA6NGU5 568 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 ARPC3O15145 178 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 DIRAS1O95057 198 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 GRPP07492 148 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 ANOS1P23352 680 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 POU4F2Q12837 409 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 RFX4Q33E94 735 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 GDPGP1Q6ZNW5 385 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 PIP4P2Q8N4L2 257 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 GCSAMQ8N6F7 178 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 RP9Q8TA86 221 aaKnown RBP17.41■□□□□ 0.38
CD47-202ENST00000361309 MAP6Q96JE9 813 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 OR52D1Q9H346 318 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 DPAGT1Q9H3H5 408 aa17.41■□□□□ 0.38
CD47-202ENST00000361309 MRPL22Q9NWU5 206 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms