RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 TCRBV16S1A1N1A0A5B0 115 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 HSPB2A8KAH6 182 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 M0QZK8 103 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 GGCTO75223 188 aaKnown RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 HSPB2Q16082 182 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF718Q3SXZ3 478 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 GRINAQ7Z429 371 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 LHFPL5Q8TAF8 219 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 IFI44Q8TCB0 444 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 TAAR9Q96RI9 348 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 ARID1BQ8NFD5 2236 aaPredicted RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 FZD6O60353 706 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 LIMS3P0CW19 117 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 LIMS4P0CW20 117 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 EN2P19622 333 aaPredicted RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 SDHBP21912 280 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 SH2D5Q6ZV89 423 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 GPR84Q9NQS5 396 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 DCAF16Q9NXF7 216 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 KIAA1324LA8MWY0 1029 aaPredicted RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF207O43670 478 aaKnown RBP12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 GRPP07492 148 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 HOXC13P31276 330 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 CD200P41217 278 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 OR8B4Q96RC9 309 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 CALHM2Q9HA72 323 aa12.18□□□□□ -0.46
CCDC144A-203ENST00000360495 RPLP1P05386 114 aaKnown RBP12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 ABOP16442 354 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 LIM2P55344 173 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 PCBP3P57721 371 aaKnown RBP12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 DHRS11Q6UWP2 260 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 NHLRC1Q6VVB1 395 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 DND1Q8IYX4 353 aaKnown RBP12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 OR2A1Q8NGT9 310 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 PACRGQ96M98 296 aaPredicted RBP12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 GPR87Q9BY21 358 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 LMAN1LQ9HAT1 526 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 R4GMQ9 66 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 MYH9P35579 1960 aaKnown RBP12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 UBE2L5PA0A1B0GUS4 154 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 RUNX2Q13950 521 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 TMEM241Q24JQ0 296 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 ELFN2Q5R3F8 820 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 ETFBKMTQ8IXQ9 262 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 SIGLEC11Q96RL6 698 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 FGF9P31371 208 aaPredicted RBP12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 EIF1P41567 113 aaKnown RBP12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 CRYBB2P43320 205 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 UBE3DQ7Z6J8 389 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 CDC20BQ86Y33 519 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 UQCC1Q9NVA1 299 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 SLC17A4Q9Y2C5 497 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 ADH4P08319 380 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 MRM1Q6IN84 353 aaKnown RBP12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 SIRT6Q8N6T7 355 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 ARIH2OSQ8N7S6 290 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 HLA-CQ95604 372 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 SLC46A2Q9BY10 475 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 HS3ST2Q9Y278 367 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 DLG5Q8TDM6 1919 aa12.17□□□□□ -0.46
CCDC144A-203ENST00000360495 TMEM218A2RU14 115 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 TMEM189-UBE2V1I3L0A0 370 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 PTHLHP12272 177 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ATF1P18846 271 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 IL3RAP26951 378 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 CNN1P51911 297 aaKnown RBP12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 DUSP8Q13202 625 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 BARX1Q9HBU1 254 aaPredicted RBP12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 FOXJ3Q9UPW0 622 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 MBLAC1A4D2B0 266 aaPredicted RBP12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 F2RP25116 425 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ASCL1P50553 236 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 OR8B8Q15620 311 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 AWAT1Q58HT5 328 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ARRDC1Q8N5I2 433 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 KLHDC9Q8NEP7 349 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 PINX1Q96BK5 328 aaKnown RBP12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 C19orf53Q9UNZ5 99 aaPredicted RBP12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 XRN1Q8IZH2 1706 aaKnown RBP12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 C4orf47A7E2U8 309 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 HMSDA8MTL9 139 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 G3V3Y1 287 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 EIF4E2O60573 245 aaKnown RBP12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ARG1P05089 322 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ZNF865P0CJ78 1059 aaPredicted RBP12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ABCD3P28288 659 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 NHLH1Q02575 133 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 NHLH2Q02577 135 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 MPPED2Q15777 294 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 NKG7Q16617 165 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ZDHHC22Q8N966 263 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ERGIC1Q969X5 290 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 ISOC2Q96AB3 205 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 BPIFB3P59826 476 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 DHRS2Q13268 280 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 LHFPL2Q6ZUX7 228 aa12.16□□□□□ -0.46
CCDC144A-203ENST00000360495 RDH5Q92781 318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms