RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 RFLNAQ6ZTI6 216 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 ZNF627Q7L945 461 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 C17orf64Q86WR6 236 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 ZNF676Q8N7Q3 588 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 SLC35G3Q8N808 338 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 ZNF615Q8N8J6 731 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 ADAMTS15Q8TE58 950 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 C4orf45Q96LM5 186 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 NUDT9Q9BW91 350 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 KLF16Q9BXK1 252 aaPredicted RBP6.89□□□□□ -1.31
CCR9-201ENST00000355983 TTTY10Q9BZA0 68 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 OR11A1Q9GZK7 315 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 CTDSP1Q9GZU7 261 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 SRD5A3Q9H8P0 318 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 KIAA1456Q9P272 454 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 FBLN5Q9UBX5 448 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 SLC25A13Q9UJS0 675 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 FOXD3Q9UJU5 478 aaPredicted RBP6.89□□□□□ -1.31
CCR9-201ENST00000355983 RAB22AQ9UL26 194 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 ZFP30Q9Y2G7 519 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 PUS1Q9Y606 427 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCR9-201ENST00000355983 TMEM14AQ9Y6G1 99 aa6.89□□□□□ -1.31
CCR9-201ENST00000355983 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 SRP19P09132 144 aaKnown RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 LAMP2P13473 410 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 TMEM11P17152 192 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 AKR1C4P17516 323 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 BCKDHBP21953 392 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 AK4P27144 223 aaPredicted RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 APLNRP35414 380 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 GABRA4P48169 554 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 LSSP48449 732 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 PAX5Q02548 391 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 VGLL4Q14135 290 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 ZNF506Q5JVG8 444 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 MFSD12Q6NUT3 480 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 CLEC18BQ6UXF7 455 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 Q7L0L9 218 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 P4HA3Q7Z4N8 544 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 TGIF2LYQ8IUE0 185 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 ZNF619Q8N2I2 560 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 OR51A7Q8NH64 312 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 MFSD8Q8NHS3 518 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 MRGPRDQ8TDS7 321 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 TMEM230Q96A57 120 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 FAM122AQ96E09 287 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 CNRIP1Q96F85 164 aaPredicted RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 C20orf144Q9BQM9 153 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 URM1Q9BTM9 101 aaKnown RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 TCEAL2Q9H3H9 227 aaPredicted RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 B4GALT6Q9UBX8 382 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 YIPF1Q9Y548 306 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 TRBV23OR9-2A0A075B6M9 112 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 TCRBV21S2A2A0A5A6 115 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 OR2AG2A6NM03 316 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 CLDN34H7C241 214 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 MASP2O00187 686 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 SMAD9O15198 467 aaKnown RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 COCHO43405 550 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 NME2P1O60361 137 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 FCMRO60667 390 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 LDB3O75112 727 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 MTX2O75431 263 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 IFNA6P05013 189 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 IL6RP08887 468 aaPredicted RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 CST2P09228 141 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 OR13C7P0DN81 318 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 TMEM33P57088 247 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 RANP62826 216 aaKnown RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 ZNF117Q03924 483 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 ODF4Q2M2E3 257 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 SLC48A1Q6P1K1 146 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 GDPD4Q6W3E5 623 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 OR4K13Q8NH42 304 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 NPRL2Q8WTW4 380 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 SLC25A43Q8WUT9 341 aaPredicted RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 ARSGQ96EG1 525 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 LINC00615Q96LM1 132 aaPredicted RBP6.88□□□□□ -1.31
CCR9-201ENST00000355983 INTS14Q96SY0 518 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 PRRX2Q99811 253 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 NIPSNAP3BQ9BS92 247 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 ALG12Q9BV10 488 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 LPAR2Q9HBW0 351 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 MSL2Q9HCI7 577 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 IER3IP1Q9Y5U9 82 aa6.88□□□□□ -1.31
CCR9-201ENST00000355983 COL4A2P08572 1712 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 ZNF840PA6NDX5 716 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 LEFTY2O00292 366 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 LILRB3O75022 631 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 IRF1P10914 325 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 ZNF616Q08AN1 781 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 DMRTA1Q5VZB9 504 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 FBXW12Q6X9E4 464 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 GALNTL5Q7Z4T8 443 aa6.87□□□□□ -1.31
CCR9-201ENST00000355983 TRAPPC6BQ86SZ2 158 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms