RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FCN3O75636 299 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 WNT2P09544 360 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 CA6P23280 308 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 TPTEP56180 551 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 ECH1Q13011 328 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 TUSC1Q2TAM9 212 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 TMEM236Q5W0B7 351 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 SHQ1Q6PI26 577 aaKnown RBP14□□□□□ -0.17
PDLIM7-201ENST00000355572 PEG10Q86TG7 708 aaKnown RBP14□□□□□ -0.17
PDLIM7-201ENST00000355572 OR6K6Q8NGW6 343 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 DACT3Q96B18 629 aaPredicted RBP14□□□□□ -0.17
PDLIM7-201ENST00000355572 LRGUKQ96M69 825 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 C7orf69Q9H7B7 122 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 NTN4Q9HB63 628 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 CENPMQ9NSP4 180 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 UFSP2Q9NUQ7 469 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 TMEM100Q9NV29 134 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 PDP1Q9P0J1 537 aaPredicted RBP14□□□□□ -0.17
PDLIM7-201ENST00000355572 KLHDC2Q9Y2U9 406 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 POLR3KQ9Y2Y1 108 aaPredicted RBP14□□□□□ -0.17
PDLIM7-201ENST00000355572 N6AMT1Q9Y5N5 214 aa14□□□□□ -0.17
PDLIM7-201ENST00000355572 TCRBV3S1A0A5B6 114 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 AQP12BA6NM10 295 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 SURF4O15260 269 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF12P17014 697 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 FMO3P31513 532 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 GRK5P34947 590 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 MDH2P40926 338 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 CD200P41217 278 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 GATA4P43694 442 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 KLHL12Q53G59 568 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 TEX30Q5JUR7 227 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 PGAP1Q75T13 922 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 PRSS45Q7RTY3 260 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 MRPL21Q7Z2W9 205 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 DPY19L4Q7Z388 723 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 WDR86Q86TI4 376 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 AQP12AQ8IXF9 295 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 TIGD4Q8IY51 512 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 BCL6BQ8N143 479 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 BBS1Q8NFJ9 593 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 BCAS4Q8TDM0 211 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 KCNJ15Q99712 375 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 COPS4Q9BT78 406 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 ABHD6Q9BV23 337 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 MARCH7Q9H992 704 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 PCDHB10Q9UN67 800 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 BAIAP2Q9UQB8 552 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 POMPQ9Y244 141 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 INSIG2Q9Y5U4 225 aa13.99□□□□□ -0.17
PDLIM7-201ENST00000355572 ARRDC5A6NEK1 342 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 J3QLI3 93 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 SELENOFO60613 162 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 FOXH1O75593 365 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 SRP9P49458 86 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 ELF3P78545 371 aaPredicted RBP13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF154Q13106 437 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 EIF2B1Q14232 305 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 GINS1Q14691 196 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF404Q494X3 552 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 LIPNQ5VXI9 398 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 SLC27A4Q6P1M0 643 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF826PQ6ZT77 177 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 ERI1Q8IV48 349 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 SPICQ8N5J4 248 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 ZDHHC22Q8N966 263 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 OR56B2PQ8NGI1 322 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 OR6N2Q8NGY6 317 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 TEX47Q8TBZ9 253 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 ZMYND19Q96E35 227 aaPredicted RBP13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 CADM1Q9BY67 442 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 CTSZQ9UBR2 303 aa13.98□□□□□ -0.17
PDLIM7-201ENST00000355572 RIIAD1A6NNX1 92 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF878C9JN71 531 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 H3BN98 237 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 FKBP6O75344 327 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 POU1F1P28069 291 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 CD80P33681 288 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 HILS1P60008 231 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 CDK5Q00535 292 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 FLOT2Q14254 428 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF181Q2M3W8 571 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 PLBD1Q6P4A8 553 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 DRAM2Q6UX65 266 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF841Q6ZN19 808 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 SPATA24Q86W54 205 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 KLBQ86Z14 1044 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 KLHL36Q8N4N3 616 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 PAPD5Q8NDF8 572 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 SPTSSAQ969W0 71 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 OTULINQ96BN8 352 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF48Q96MX3 618 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 INTS14Q96SY0 518 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 OR51V1Q9H2C8 321 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 DNAJC27Q9NZQ0 273 aa13.97□□□□□ -0.17
PDLIM7-201ENST00000355572 PPIAL4EA0A075B759 164 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 IGHV3OR16-10A0A075B7F0 116 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 PPIAL4CA0A0B4J2A2 164 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 PRR32B1ATL7 298 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 PPIAL4DF5H284 164 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms