RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 POLEQ07864 2286 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 AGPAT2O15120 278 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ARPC3O15145 178 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 RTL6Q6ICC9 239 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 SUMF1Q8NBK3 374 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 HYLS1Q96M11 299 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 GUCD1Q96NT3 240 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 SPIN2AQ99865 258 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 SPIN2BQ9BPZ2 258 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 EIF5A2Q9GZV4 153 aaKnown RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 MOB1AQ9H8S9 216 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 RBFOX1Q9NWB1 397 aaKnown RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 COL6A6A6NMZ7 2263 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 GREB1Q4ZG55 1949 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 C17orf51A8MQB3 221 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 NPIPB8E9PQR5 432 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ZFPL1O95159 310 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 EIF4EP06730 217 aaKnown RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 GSTP1P09211 210 aaKnown RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 HLA-DOBP13765 273 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 PI3P19957 117 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 PTGER4P35408 488 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 TPBGQ13641 420 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 GTPBP8Q8N3Z3 284 aaPredicted RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 OR5T1Q8NG75 326 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ZNF285Q96NJ3 590 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 GPA33Q99795 319 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 SEC22CQ9BRL7 303 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 NARFLQ9H6Q4 476 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 RANGRFQ9HD47 186 aaPredicted RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 PLEKHB1Q9UF11 243 aaPredicted RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 UBQLN2Q9UHD9 624 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ZNF732B4DXR9 585 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ZNHIT1O43257 154 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 RAF1P04049 648 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 LIMS3P0CW19 117 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 LIMS4P0CW20 117 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ZNF728P0DKX0 622 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 PTHLHP12272 177 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 RPS23P62266 143 aaKnown RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 SORDQ00796 357 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 C8orf82Q6P1X6 216 aaPredicted RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 FJX1Q86VR8 437 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 CMTM4Q8IZR5 234 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 DEDD2Q8WXF8 326 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 WDR54Q9H977 334 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 HRASLSQ9HDD0 168 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ZNF705EA8MWA4 302 aaPredicted RBP12.24□□□□□ -0.45
SMC6-201ENST00000351948 E9PI62 339 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 CD96P40200 585 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 SLC23A3Q6PIS1 610 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 C17orf47Q8NEP4 570 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 LOXL4Q96JB6 756 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 WFDC6Q9BQY6 131 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 B4E171 279 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 PRAF2O60831 178 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 SIX6O95475 246 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 TCRBP04435 133 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 ADH6P28332 368 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 TSPAN7P41732 249 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 OR2B11Q5JQS5 317 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 OR2A2Q6IF42 318 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 CA5BP1Q8WTZ4 195 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 C7orf50Q9BRJ6 194 aaKnown RBP12.24□□□□□ -0.45
SMC6-201ENST00000351948 EXOSC3Q9NQT5 275 aaKnown RBP12.24□□□□□ -0.45
SMC6-201ENST00000351948 ANK1P16157 1881 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 MEIKINA0A087WXM9 373 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 AIPO00170 330 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 PHF1O43189 567 aaPredicted RBP12.24□□□□□ -0.45
SMC6-201ENST00000351948 XRCC2O43543 280 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 ALOX5APP20292 161 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 TAS2R20P59543 309 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 ZDHHC23Q8IYP9 409 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 ADGRL4Q9HBW9 690 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 ZNF236Q9UL36 1845 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 SDHBP21912 280 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 DLX5P56178 289 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 CYCSP99999 105 aaKnown RBP12.24□□□□□ -0.45
SMC6-201ENST00000351948 NKX6-3A6NJ46 265 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 LINC01387J3KSC0 135 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 LINC00271P0C7V0 271 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 RAC3P60763 192 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 RNPS1Q15287 305 aaKnown RBP12.24□□□□□ -0.45
SMC6-201ENST00000351948 TSC22D1Q15714 1073 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 MESTQ5EB52 335 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 RGS7BPQ6MZT1 257 aaPredicted RBP12.24□□□□□ -0.45
SMC6-201ENST00000351948 PRR7Q8TB68 274 aa12.24□□□□□ -0.45
SMC6-201ENST00000351948 TINAGL1Q9GZM7 467 aaPredicted RBP12.24□□□□□ -0.45
SMC6-201ENST00000351948 LIPT2A6NK58 231 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 UBBP0CG47 229 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 ERP29P30040 261 aaKnown RBP12.23□□□□□ -0.45
SMC6-201ENST00000351948 ZFP36L2P47974 494 aaKnown RBP12.23□□□□□ -0.45
SMC6-201ENST00000351948 CAMLGP49069 296 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 BCL2A1Q16548 175 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 SCARF2Q96GP6 870 aaPredicted RBP12.23□□□□□ -0.45
SMC6-201ENST00000351948 KCNJ15Q99712 375 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 HS3ST3B1Q9Y662 390 aa12.23□□□□□ -0.45
SMC6-201ENST00000351948 ARHGEF17Q96PE2 2063 aaPredicted RBP12.23□□□□□ -0.45
SMC6-201ENST00000351948 CDC14BO60729 498 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms