RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 KIAA0040Q15053 153 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 HSPB2Q16082 182 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 EXTL1Q92935 676 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 HLA-CQ95604 372 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 TEX101Q9BY14 249 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 EPHX3Q9H6B9 360 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 B4GALT7Q9UBV7 327 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 SLC5A6Q9Y289 635 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 AMDHD2Q9Y303 409 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 SCGB2A1O75556 95 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 EIF3GO75821 320 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL12A1-202ENST00000345356 DTYMKP23919 212 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 CD81P60033 236 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 PUSL1Q8N0Z8 303 aaKnown RBP10.97□□□□□ -0.65
COL12A1-202ENST00000345356 TCTEX1D1Q8N7M0 179 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 NANOS1Q8WY41 292 aaKnown RBP10.97□□□□□ -0.65
COL12A1-202ENST00000345356 PDFQ9HBH1 243 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 C19orf53Q9UNZ5 99 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-202ENST00000345356 A8MVM7 634 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 CFDP00746 253 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-202ENST00000345356 HLA-DRB3P79483 266 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 PMP22Q01453 160 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 C1orf140Q5VVS0 124 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 GOT1L1Q8NHS2 421 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-202ENST00000345356 TCTN2Q96GX1 697 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 THOC3Q96J01 351 aaKnown RBP10.97□□□□□ -0.65
COL12A1-202ENST00000345356 RASL12Q9NYN1 266 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 LRIT1Q9P2V4 623 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 GOLT1BQ9Y3E0 138 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 PTP4A3O75365 173 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 WNT11O96014 354 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 MT-ATP6P00846 226 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 OR5I1Q13606 314 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 TMEM176BQ3YBM2 270 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-202ENST00000345356 TAAR9Q96RI9 348 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 SLC22A12Q96S37 553 aa10.97□□□□□ -0.65
COL12A1-202ENST00000345356 FAM221AA4D161 298 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 HSBP1O75506 76 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 SFT2D2O95562 160 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 FPR2P25090 351 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 SLC16A14Q7RTX9 510 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 CAMKMTQ7Z624 323 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 SLAMF6Q96DU3 332 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 CAPNS2Q96L46 248 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 DNAJB11Q9UBS4 358 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 RGPD2P0DJD1 1756 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 PRSS38A1L453 326 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 TTRP02766 147 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 FCER1GP30273 86 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 CCKARP32238 428 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 BSGP35613 385 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 GRB2P62993 217 aaKnown RBP10.96□□□□□ -0.65
COL12A1-202ENST00000345356 RPL18Q07020 188 aaKnown RBP10.96□□□□□ -0.65
COL12A1-202ENST00000345356 TIGITQ495A1 244 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 NSUN5P2Q63ZY6 315 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 Q6ZN92 141 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 CATSPERDQ86XM0 798 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 BATF2Q8N1L9 274 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 MS4A3Q96HJ5 214 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 R4GMQ9 66 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 OR5K3A6NET4 321 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 VSTM5A8MXK1 200 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 H3BP45 60 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 DUS4LO95620 317 aaKnown RBP10.96□□□□□ -0.65
COL12A1-202ENST00000345356 COX5AP20674 150 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 KLF9Q13886 244 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-202ENST00000345356 OR4D9Q8NGE8 314 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 ZNF775Q96BV0 537 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-202ENST00000345356 FAM173AQ9BQD7 235 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 SLC17A5Q9NRA2 495 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
COL12A1-202ENST00000345356 TMEM272A0A1B0GTI8 110 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 ZFPL1O95159 310 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 OR10J4P0C629 311 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 PGFP49763 221 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 NTHL1P78549 312 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 ARIH2OSQ8N7S6 290 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 UBL7Q96S82 380 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-202ENST00000345356 MYOTQ9UBF9 498 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-202ENST00000345356 KIR2DS1A0A191URI9 304 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 OR5H15A6NDH6 313 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 OR5H1A6NKK0 313 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 POU3F2P20265 443 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-202ENST00000345356 KIR2DS4P43632 304 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 HAAOP46952 286 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 GABRA4P48169 554 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 KIR2DS1Q14954 304 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 MOB1BQ7L9L4 216 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 C12orf76Q8N812 135 aaPredicted RBP10.96□□□□□ -0.66
COL12A1-202ENST00000345356 RAB9BQ9NP90 201 aa10.96□□□□□ -0.66
COL12A1-202ENST00000345356 LOC102724200A0A096LPH7 203 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-202ENST00000345356 MFNGO00587 321 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 GEMIN2O14893 280 aaKnown RBP10.95□□□□□ -0.66
COL12A1-202ENST00000345356 GP1BAP07359 652 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 SLC25A4P12235 298 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 UBE2G2P60604 165 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 TMEM241Q24JQ0 296 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 C17orf78Q8N4C9 275 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 OR10J5Q8NHC4 309 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms