RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CADM3Q8N126 398 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 OR14K1Q8NGZ2 314 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 OR1F12Q8NHA8 337 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 AUNIPQ9H7T9 357 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 MOB1AQ9H8S9 216 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 SP140LQ9H930 580 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 PARPBPQ9NWS1 579 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 GTF3C1Q12789 2109 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 RPL36A-HNRNPH2H7BZ11 118 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 CALCBP10092 127 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 CCL2P13500 99 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 CCL1P22362 96 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 DDOSTP39656 456 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 RAB35Q15286 201 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 ZNF529Q6P280 563 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 Q6ZS92 163 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 MCEMP1Q8IX19 187 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 FAM3DQ96BQ1 224 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 SGK3Q96BR1 496 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 GAL3ST1Q99999 423 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 THAP7Q9BT49 309 aaPredicted RBP11.85□□□□□ -0.51
CDC42-202ENST00000344548 CLCF1Q9UBD9 225 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 PTPRQQ9UMZ3 2332 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 IGKV1-9A0A0C4DH69 117 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 IL18BPO95998 194 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 CDK2P24941 298 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 PTBP1P26599 531 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDC42-202ENST00000344548 CFPP27918 469 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 PTH2RP49190 550 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 ASAH1Q13510 395 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 KRTAP27-1Q3LI81 207 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 PLEKHN1Q494U1 663 aaPredicted RBP11.84□□□□□ -0.51
CDC42-202ENST00000344548 PABPC1L2AQ5JQF8 200 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 ZNF100Q8IYN0 542 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 OR5AS1Q8N127 324 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 JAGN1Q8N5M9 183 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 CYYR1Q96J86 154 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 TRIB1Q96RU8 372 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 ABCG5Q9H222 651 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 MMP28Q9H239 520 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 CNTD2Q9H8S5 307 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 RHBDL2Q9NX52 303 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 B3GNT2Q9NY97 397 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 CKLFQ9UBR5 152 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 LHX6Q9UPM6 363 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 TIMM10BQ9Y5J6 103 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 TMEM272A0A1B0GTI8 110 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 UBL3O95164 117 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 SDHBP21912 280 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 KIR2DL3P43628 341 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 HTR5AP47898 357 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 BCAP31P51572 246 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 DEFA1P59665 94 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 DEFA3P59666 94 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 TNK1Q13470 666 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 SLC36A2Q495M3 483 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 PYHIN1Q6K0P9 492 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 CRIP3Q6Q6R5 217 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 OR1M1Q8NGA1 313 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 THRSPQ92748 146 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 YIPF5Q969M3 257 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 HAVCR1Q96D42 359 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 HDHD2Q9H0R4 259 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 UPB1Q9UBR1 384 aa11.84□□□□□ -0.51
CDC42-202ENST00000344548 LOC100509620A0A075B734 347 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 LOC390937A0A1W2PQ73 354 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 ZNF587BE7ETH6 402 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 AQP7O14520 342 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 PFDN1O60925 122 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 ACKR3P25106 362 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 HTR2CP28335 458 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 SCRN3Q0VDG4 424 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 RAB11BQ15907 218 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 TRIQKQ629K1 86 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 MINDY2Q8NBR6 621 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 ABHD17AQ96GS6 310 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 PRR14LQ5THK1 2151 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 MEIOCA2RUB1 952 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 TTLL8A6PVC2 850 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 DLL1O00548 723 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 FAHP16930 419 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 BDKRB2P30411 391 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 ART1P52961 327 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 GLT8D1Q68CQ7 371 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 C9orf106Q8NAJ2 232 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 SETD6Q8TBK2 473 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 DKK4Q9UBT3 224 aa11.83□□□□□ -0.52
CDC42-202ENST00000344548 FAM157BP0CG42 384 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 MMP15P51511 669 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 FOXF2Q12947 444 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 C1orf100Q5SVJ3 147 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 DOK3Q7L591 496 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 ZNF627Q7L945 461 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 OR5D14Q8NGL3 314 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 NPRL2Q8WTW4 380 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 SPTSSAQ969W0 71 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 RFT1Q96AA3 541 aa11.82□□□□□ -0.52
CDC42-202ENST00000344548 TMEM138Q9NPI0 162 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms